KEGG   Pseudomonas cucumis: PSH97_06680
Entry
PSH97_06680       CDS       T09632                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pcuc  Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:pcuc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcuc03016]
    PSH97_06680 (rnd)
Enzymes [BR:pcuc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     PSH97_06680 (rnd)
Transfer RNA biogenesis [BR:pcuc03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    PSH97_06680 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C LprI
Other DBs
NCBI-ProteinID: WLG86204
UniProt: A0ABY9F0J3
LinkDB
Position
1487657..1488790
AA seq 377 aa
MAIDIHWIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPL
TIDNWQPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDALHLAEVFVQLRPKLSDEKYAWV
LEDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWRETQARARDLPRNRII
REHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLDLIKRSGSVSPDQWPPAVPEPL
PVDAAALVKQLRAIGQAEAERLNIAPELMLRKKTLEALLKSGFPNGPYQLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq 1134 nt   +upstreamnt  +downstreamnt
gtggccatcgatattcactggattcgcgacaacgatagcctcggtcagttttgcgccgag
tggcagcagctgccattcgttgccctcgacaccgaattcatgcgggtcgacaccttttac
ccgatcgcaggcctgctgcagatcggcgatggcgtacgcgcttacctgattgatccactg
accatcgacaattggcagccattggccgcgttgctggaaaaccctgccgtggtcaaggtc
gtgcatgcgtgcagcgaagacctcgaagtcctgctgcgcctgaccggcagcctgccggcg
ccgctgttcgacacccaactggccgccgcttacctgaacctcggtttctccatgggttat
tcgcggctggtgcaggaagtgctcggcatcgacctgcccaagggcgaaacccgttccgac
tggctgcaacgtccgctgtccgacacccagatcagctacgccgccgaagatgccttgcac
ctggcggaagttttcgtacagctgcgtccgaagctttctgacgaaaaatacgcctgggtt
ttggaagacggtgccgagctggtggccaacctgcgtcgcgaggtcgacccgtatgaggtc
tatcgcgacgccaaactggcctggaaactgtcccgcgcccaactcgccgtgttgcgtgag
ctttgcgcctggcgtgagacgcaggcccgtgcccgtgatctgccgcgcaaccgcatcatc
cgtgagcattccctgtggccattggcgcgcacgcaaccggacaacctcggcgcgctggcg
aaaatcgaagacatgcacccgcgtaccgtgcgtcaggacggcgaatttctgcttgatctg
atcaagcgctctggcagtgtgtcgcctgatcaatggccaccggcggtgccggagccgttg
ccggtggacgccgccgcgctggtcaaacagctgcgcgccatcggccaggctgaagccgaa
cgcctgaacatcgcgccagaactgatgctgcgcaagaaaaccctggaagcgctgctcaag
agcggcttccccaatggtccttaccaattgcctgattcgctgcgtggctggcgccgcgaa
ttgatgggccaggcgctgctcgacagcctggccaccgccggagaacagccttga

DBGET integrated database retrieval system