KEGG   Pseudomonas cucumis: PSH97_07925
Entry
PSH97_07925       CDS       T09632                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
pcuc  Pseudomonas cucumis
Pathway
pcuc02020  Two-component system
pcuc02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pcuc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSH97_07925
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PSH97_07925
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcuc02022]
    PSH97_07925
   02035 Bacterial motility proteins [BR:pcuc02035]
    PSH97_07925
Two-component system [BR:pcuc02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   PSH97_07925
Bacterial motility proteins [BR:pcuc02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    PSH97_07925
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 AAA_2 MCM AAA MerR AAA_3 HTH_30 HTH_20 AAA_19 FleQ nSTAND3 HTH_24 Sigma70_r4_2 HTH_11 HTH_23 AAA_22 HTH_28 DUF2249 HTH_17 Myosin_head NPHP3_N HTH_Mga AAA_7 ATPase
Other DBs
NCBI-ProteinID: WLG86437
UniProt: A0ABY9F0U8
LinkDB
Position
1756743..1758128
AA seq 461 aa
MAIKVLLVEDDRALREALADTLLLAGHDYTAVGSAEEALTAVGAEAFNLVLSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHALG
NLGATESEGPVAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQHSHRASQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPITLDIRVVATTNRDLAAEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLAKHVNKMKHAAAKLSPEAQACLISYPWPGNVRELDNAIQRALIL
QQGGLIQPQDFCLAGPVVCAPLPTLAPTPVRAIEVEAESAGALGDDLRRREFQMIIDTLR
SERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggccatcaaggttttactggtcgaggatgaccgcgcgctacgggaagcattggccgat
acgctgttgcttgccgggcacgattacacggcggtcggttcggcggaggaggcactgaca
gcggtcggcgccgaggcatttaacctggtgctcagtgacgtcaacatgccgggcatggac
ggtcatcaactgctgggattgctgcgggctcgtcagccgcagttgccggtgttgctgatg
accgctcacggcgctgtcgagcgcgcggtcgacgccatgcgtcagggcgcggcggattat
ctggtcaagccgttcgaacccaaagccttgctcgatctggtggcgcgtcacgcactgggc
aatctcggcgcgaccgagagtgaagggcctgtggcgttcgagcccgccagtgcgcaattg
ctggagttggccgcgcgggtggcgcgcagtgattccacggtgttgatctccggtgagtcc
gggaccggcaaggaagtgctggcgcgttacatccatcagcactctcaccgcgccagccag
ccgttcattgcgatcaactgtgcagcgatcccggacaacatgctcgaagccaccttgttc
ggtcacgaaaagggttcgttcaccggcgccatcgcggcgcaggccggcaagttcgaacag
gccgatggcggcacgatcctgctcgatgaaatctccgaaatgcccctcggccttcaagcc
aaattactgcgggtattgcaggagcgtgaagtcgagcgagtcggcgcacgcaagccgatc
acgctggacatccgagtggtcgccaccaccaaccgtgacctggccgctgaagtggcggcg
gggcgttttcgtgaagacctttactatcgcctgtcggtgtttccgctggcctggcgtccg
ctgcgcgagcgcaccgccgacatcctgccgctggccgagcgtctgctggccaaacacgtc
aataaaatgaagcatgccgcggcgaagctctcgcccgaggcgcaggcgtgcctgatcagt
tatccgtggccgggcaacgtgcgtgaactggataacgcgatccagcgtgccttgattctg
cagcagggcggcttgatccagccgcaggatttctgtctggccgggcctgtggtgtgtgcg
ccgttaccgacattggcgccgacgcccgtgcgcgcaatagaagtcgaagccgaatcggcg
ggcgctctcggcgatgacctgcggcgccgtgaattccagatgattattgacaccttgcgc
tccgagcgcggtcgtcgcaaagaagccgccgagcggctgggcatcagcccgcgcaccttg
cgctacaagctggcgcagatgcgtgacgccggaatggacgtggaagcgtacttgttcgcc
acgtaa

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