Pseudomonas cucumis: PSH97_09545
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Entry
PSH97_09545 CDS
T09632
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc00071
Fatty acid degradation
pcuc00280
Valine, leucine and isoleucine degradation
pcuc00310
Lysine degradation
pcuc00362
Benzoate degradation
pcuc00380
Tryptophan metabolism
pcuc00410
beta-Alanine metabolism
pcuc00640
Propanoate metabolism
pcuc00650
Butanoate metabolism
pcuc00907
Pinene, camphor and geraniol degradation
pcuc00930
Caprolactam degradation
pcuc01100
Metabolic pathways
pcuc01110
Biosynthesis of secondary metabolites
pcuc01120
Microbial metabolism in diverse environments
pcuc01200
Carbon metabolism
pcuc01212
Fatty acid metabolism
Module
pcuc_M00087
beta-Oxidation
pcuc_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSH97_09545 (fadB)
00650 Butanoate metabolism
PSH97_09545 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSH97_09545 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSH97_09545 (fadB)
00310 Lysine degradation
PSH97_09545 (fadB)
00380 Tryptophan metabolism
PSH97_09545 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSH97_09545 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSH97_09545 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSH97_09545 (fadB)
00930 Caprolactam degradation
PSH97_09545 (fadB)
Enzymes [BR:
pcuc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSH97_09545 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSH97_09545 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSH97_09545 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSH97_09545 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WLG86742
UniProt:
A0ABY9F3R9
LinkDB
All DBs
Position
2097521..2099668
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMANTAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLQEAALNLVKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEANGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEGKVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADPSVLEVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgtcaggctgtagacaccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtattcatcgtcggcgccgacatcaccgaattcgtcgacaacttcaagctg
ccggatgccgagcttgtcgctggtaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtcccgactgtcgccgcgatcaatggcatcgcactgggtggcggtctggaa
atgtgcctggcggcagatttccgcgtcatggccaataccgccaaaatcggtctgccggaa
gtcaagctgggcatctacccgggcttcggcggtactgtgcgtctgccgcgcatcatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgcgctgaagacgcgctg
aaagtcggtgccgtcgacgccgtggtcgcgccagagaaattgcaggaagcggctctgaat
ctggtcaaaggcgccatctccggtgagtttgactacaaggccaagcgtcagccgaagctc
gaaaagctcaagctcaacgccattgaacaaatgatgtcgtttgaaaccgccaaaggtttc
gtggcaggccaggcgggcccgaactacccggcaccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggcgctggaagtcgaagccaacggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgaaatcgccagggacgtgaagcaggccgccgtattg
ggcgccggcatcatgggtggcggtatcgcttatcagtcggcctccaaaggtacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcaagggctggcagaagccgccaagctg
ctggtgggccgcgttgataaaggtcgcatgactccggcgaaaatggccgaagtgctcaat
ggcattcgtccgaccctgtcctacggtgatttcggtcatgtcgacctggtcgtcgaagcc
gtggtcgagaacccgaaggtcaagcaagccgttctggccgaagttgaaggcaaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcaccttgctggccaaagcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgatccgtggcgagaagtccagcgaagtggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaaactggtcagcgccggtgtggac
ttcgtccgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgcgatgtaatggctgaaggcttc
ccggatcgcatgaaggacgaccgccgttcggccgttgacgtgctctacgaagccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagcgcggcaagcag
aagaaagtcgccgatccttcggtactggaagtgctcaagccaatcgtgttcgaacagcgc
gaagtcactgatgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgatatgggcctggtctac
ggtattggttttcctccattccgtggcggtgcgctgcgctacatcgactcgatcggtgtt
gcagagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaaaaacggtcagagctttttcggttaa
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