Pseudomonas cucumis: PSH97_09800
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Entry
PSH97_09800 CDS
T09632
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcuc01002
]
PSH97_09800
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcuc01011
]
PSH97_09800
Peptidases and inhibitors [BR:
pcuc01002
]
Cysteine peptidases
Family C82
PSH97_09800
Peptidoglycan biosynthesis and degradation proteins [BR:
pcuc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSH97_09800
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WLG86789
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Position
2148914..2150665
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AA seq
583 aa
AA seq
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MGQLTRLFVISRIFFMGFLISGMAVAQTSPIEPASPVSMIAEAAPGDYVGQAIQAALAPL
SSAFPPLLTSPRHQRVDVNRAVMDFYSHRGYRAAWTDDDDVVQLLKSLSDTEVDGLDPAD
FRIAELASARASLQTAASTPGQQAAFDISATQTFITALLQLRRGKVDPSRLDIHWNFDPL
GIDPREDVNLFFAALDSHDVARAFAQAPPQEAIYGTLRQGLAQLRRVRDSGGWPKIPQGQ
TLRPGMDDASVAQLRARLVAGGYLATNKNARSDYDDTVMAAVKKYQTEQYLGADGVAGPA
TLAALNVPVEARIDQVRVNMERARWLLYKLQGTFVIVDIAGYKVSFYRDGKLTWRSRVQV
GKPYRSTPIFQSEITYVTFNPTWTVPPTILVKDMLPKIRNNPGYLDANRIRVIDREGNVL
DPYTVDWENPRGLTLRQDAGSDNSLGQVVIRFPNDYAIYLHDTPHRELFAQSNRATSSGC
IRVENPLQLVELLFNDPVRWNSEGIQKQLANGKTENIRLPVKVPVLLAYWTVDLSLDGRV
TFKPDVYGYDKPVLRALNLPSERPTLDGRRAAPPSMAVGQSKL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggggcagttaacaaggttattcgtcataagccgcatattttttatgggctttctgata
agcggcatggcagttgcgcaaacttcgccgattgagccggcatctcccgttagcatgatc
gcggaggcagcgcctggcgattacgttggtcaggcgattcaggcggcgctggcgccattg
agttcggcatttcctccgttgctcacctcgccgcgtcatcagcgggtcgacgttaaccgg
gcggtgatggatttttatagccatcggggctatcgcgctgcctggacggacgatgacgat
gtcgtccagttgttgaagagcctgagcgataccgaggtcgatggcctggatcctgcggat
tttcgaattgctgaactggccagtgcccgagcgtcgctgcaaacggcagcgtcaactccc
gggcaacaggctgccttcgatatctcggcgacccagacgtttatcacggcgctgctgcag
ttgcggcgcggcaaggtcgacccttcgcggctggacatccattggaatttcgatccgctc
ggcatcgacccccgggaggacgtcaatcttttcttcgccgccctcgacagccatgacgtc
gcgcgcgcgttcgcccaggcgccgccacaagaagcaatttatggcacgttgcgacagggc
ctggcgcaactgcgcagggttcgcgacagtggcggctggccaaagattccgcaagggcag
accctcaggcccggcatggacgacgcctcggttgcgcagttgcgagcccgtttggtagcg
ggtggttatctggccacgaataagaacgcgcgctccgactacgacgacaccgtcatggcg
gcggtgaagaagtatcaaaccgagcaatacctcggggcggatggtgtggcggggccggcg
acactggcggcgctgaatgtgccggtcgaagcgcgaatcgaccaggttcgcgtgaacatg
gaacgggcacggtggctgctgtacaaactgcagggcacctttgtcatcgtcgacattgcc
gggtacaaggtttcgttctatcgcgatggcaagctgacatggcgctcccgggtgcaggtg
ggtaaaccgtatcgcagcacgccgatttttcaatcggagatcacctacgtcacgttcaac
ccgacctggacggtgccgccaaccattctggtcaaggatatgctgccgaagattcgcaac
aatcctggttaccttgatgcaaaccggattcgcgtgatcgatcgagaaggcaacgtgctc
gacccgtataccgtggattgggagaacccgcgcggcctgacgctgcggcaggatgcaggg
tcggataattcgttggggcaggtggttattcgctttcccaatgactatgcgatttatctg
cacgacacgccgcatcgtgagttgtttgcgcaatccaatcgcgcgaccagttccggctgt
attcgggtagaaaatccgctgcaattagtggagctgttgttcaacgacccggttcgctgg
aacagcgaagggattcaaaagcagttagccaacggcaagactgagaacatcaggctccct
gtgaaagtgccggtgctgttggcctattggacagtggacctgagccttgatgggcgggtg
acgttcaagcccgatgtgtatgggtacgataagccggtgttgcgggcactgaatctgccg
tcggaacggccaacgctggacgggaggcgagcggcgcctccctcgatggcggtggggcag
agcaagctgtaa
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