Pseudomonas cucumis: PSH97_09860
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Entry
PSH97_09860 CDS
T09632
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSH97_09860 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcuc03400
]
PSH97_09860 (uvrB)
DNA repair and recombination proteins [BR:
pcuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSH97_09860 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSH97_09860 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Motif
Other DBs
NCBI-ProteinID:
WLG86800
UniProt:
A0ABY9F2I2
LinkDB
All DBs
Position
2162182..2164197
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQIQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIHPAESDFEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEATEGIKVELQERLEYLRSNNKLLEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGQAPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEFESISPQTIFVSATPGNYEAEHAGRVVEQLVRPTGLVDPQ
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGAVV
PGSRSKKRKGMAKAAEESAKYEAELRSPSEISKRIRQLEEKMYQLARDLEFEAAAQLRDE
IGKLRERLIAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctagtcacccgcttcgagcccgccggcgatcagccggaagccatt
cgcctgatggtcgagggcattgaggccgggctggcgcaccagacattgctcggtgtgacc
ggctcaggcaagaccttcagcatcgccaacgtgatcgcccagatacagcgcccgacgctg
gtgctggcgcccaacaagactctggccgcgcagctgtatggcgaattcaaggcgttcttc
ccgaacaacgccgttgaatacttcgtgtcctattacgactactaccagcccgaagcctat
gtgccgtcgtccgataccttcatcgagaaggatgcctcgatcaacgaccacatcgagcag
atgcgattgtccgcgaccaaggcgctgctggagcgcaaggacgcgattatcgtcaccacg
gtgtcctgcatctacggtctgggcagtccggaaacctatttgaagatggtgttgcacgtc
gatcgcggcgacaagctcgaccagcgtgcgctgctgcgtcgcctggccgacctgcaatac
acccgcaacgacatggacttcgcccgggcgacctttcgggtgcgcggcgatgtgattgat
atccacccggcggaatccgattttgaggcgatccgcattgaactgttcgatgacgaagtg
gaaagcctgtccgccttcgatccgctgaccggtgaagtcatccgcaaactgccgcgtttc
actttctatccgaagagccactatgtgacgccgcgcgaaaccctgctcgaagctaccgaa
gggatcaaggtcgaattgcaggagcgcctggaatacctgcgctccaacaataaactgctg
gaagctcagcgacttgagcaacgcacccgtttcgacctggagatgatcctggaactgggc
tactgcaacggcatcgaaaactactcgcgctacctgtcgggccgtgagtccggccaggcg
ccgcccactttgttcgactacttgccggcggacgccttgttggtgatcgacgaatcccac
gtcagcgtgccgcaagtcggcgccatgtataaaggtgaccgttcccggaaagaaacgctg
gtggagtacggtttccgtttgccctcggccctggataaccggccgatgcgtttcgacgag
ttcgaaagcatcagtccccaaacgatttttgtctcggccacgccgggcaattacgaagcg
gagcacgccggccgagtggtcgagcaattggtgcgcccgactggcctggtggacccgcaa
atcgaaatccgtccggcgttgactcaggttgacgatttgctctcggaaatcaccaagcgc
gtggccctggaagagcgggtgctggtgaccacgctgaccaagcgcatgtccgaagacttg
accgattacctggccgaccacggcgtgcgtgtgcgttatctgcactcggacatcgacacc
gtggagcgggttgaaattattcgtgacttgcgtctcggcgtcttcgatgtgctggtgggg
atcaacctgctgcgtgaaggtctggacatgccggaagtttcgctggtggcgattcttgac
gcggacaaggaaggtttcctgcgttccgagcgctcgctgatccagaccatcggccgggcg
gcgcgcaacctcaatggtcgggcgattttgtatgcggatcgcatcaccggttccatggag
cgggcgattggcgaaaccgagcgtcgtcgcgacaagcagatcgccttcaacctggccaac
ggcatcacgccgaagggggtgttcaaagacgttgccgacatcatggaaggcgcggtcgtg
ccgggttcgcgcagcaagaaacgcaaaggcatggccaaggccgccgaggaaagtgccaag
tacgaggccgaactgcgctcgccgagcgagatcagcaagcgcattcgtcagttggaagaa
aagatgtaccaactcgcccgcgatctggaattcgaagccgcggcacagttgcgcgacgaa
atcggcaagttgcgggagcggttgatcgcggtttga
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