Pseudomonas cucumis: PSH97_10035
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Entry
PSH97_10035 CDS
T09632
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH97_10035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcuc03021
]
PSH97_10035
Transcription machinery [BR:
pcuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH97_10035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_11
HTH_29
Xre-like-HTH
PhyR_sigma-like
HTH_Tnp_ISL3
HTH_40
HTH_Tnp_4
HTH_7
HTH_28
HTH_38
TnsD
HTH_31
HTH_36
DUF6362
HTH_17
HTH_Mga
HTH_24
Mor
DUF1670
Motif
Other DBs
NCBI-ProteinID:
WLG86827
UniProt:
A0ABY9F1Z2
LinkDB
All DBs
Position
2199934..2200443
Genome browser
AA seq
169 aa
AA seq
DB search
MSDAAMPKEQTFHDLYRDHRGWLEGWLRRRMGNGCDAADLSQDTFLRLLASSQRIADLQE
PRAYLVTVGKRLLSNFYKRRSLEQAYLTALAALPEDCVPSPEQRWLLLETLQALDELLDG
LPAAVRRAFLWSQLEGLNYQQIAKRLRVSERTIKRYMAQAYEHCLLVEL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcagcgatgccgaaggagcaaaccttccacgacctgtaccgcgatcaccgt
ggctggcttgaaggctggttgagaagacgcatgggcaatggctgtgatgcggcggatctg
agccaggatacgttcctgcgtctactcgccagctctcaacgaattgccgatctgcaagag
ccccgtgcctatctggtgaccgtgggcaaacgcctgctgagtaatttctataaacgtcga
agcctcgagcaggcttatctgacggcactggcggcgttgccggaagactgtgtgccgtcg
cccgagcagcgctggttgttgctcgaaaccctgcaagctctggatgaattgctcgatgga
ttgccggcggcagtgcgtagggcgtttctctggagtcagctggaaggcttgaactatcag
caaatcgccaagcgcctgcgggtgtcggaacgcacgatcaagcgctacatggcgcaagcc
tatgagcattgcctgttggtggaactgtga
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