Pseudomonas cucumis: PSH97_12545
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Entry
PSH97_12545 CDS
T09632
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH97_12545 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcuc02044
]
PSH97_12545 (tssK)
Secretion system [BR:
pcuc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH97_12545 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
DUF7019
Mtase_EDM2
Motif
Other DBs
NCBI-ProteinID:
WLG87294
UniProt:
A0ABY9F3I1
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All DBs
Position
2726568..2727899
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AA seq
443 aa
AA seq
DB search
MSLLPDAVCWHEGMQLLPQHFQLQGLRAEALVAHFAQACNPWFWGVTRVEFDPSALSAGL
VRLINLQATLPDGLPVNLQAGVGPMLELDVSEAIDATDNATVTVYLAISPLWRAGQLLPL
KGRLQSVVGDALPDLTSGEYPESITVWRPNPRLCTQLNKADSVCLPLLRIRKEGGGFLQL
PYTPPTPCLLPESVVGRRVAALCARAREKCMFLAGRLRQAQQAGNQDDALEIRRQLTALW
ARLPEVEGTLNSRVATPQALYGLLLGLAGAWSALDPLAGVPAFAPLDFLELQRGYEAVLD
WLEKTLELIRAGYRSLAFERNEQFFSIQLPDDQPSQRLVIGLRMPNGASEQAASEWLRGA
IIASQPHIAMLSRQRMSGLSHQAMSRNEQVAYSVGDDTRLFVVTAEGQWFDGQLPLLIAA
PASKLASSPWQVVLFVAQASESA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctacctgacgcggtttgctggcatgagggcatgcagttgttgccccagcat
tttcagttgcaagggctgcgggccgaggcgctggtggcgcatttcgcccaggcctgtaat
ccgtggttctggggtgtgactcgcgttgagttcgatccctcggcattgagcgccgggctc
gtacgactgatcaatttacaggcgaccttgccggacggtttgccggtcaatctgcaggct
ggtgtcgggccgatgctggagctcgacgtcagtgaagcgatcgacgccacggacaacgcc
accgttaccgtttacctggcgatcagtccgctgtggcgcgccggtcaattgctgccgctc
aagggccgattgcaatcggtggtcggcgacgcgttgccggatctcacgagtggcgagtac
ccggaatcgatcacagtctggcgtccgaatccgcgtttgtgcacgcagttgaacaaggcg
gattcggtctgcttgccgttgctgagaattcgcaaggagggcggcggctttcttcagttg
ccgtacaccccgccgacgccgtgcctgttgcccgagtcggtagtgggtcggcgcgtggcg
gcgctgtgtgcccgggcgcgggagaaatgcatgttcctcgccggtcgtttacgccaggcg
cagcaggccggcaatcaggacgatgcgctggaaattcgccgccagttgacggcgctctgg
gcgcggttgccggaagtcgaaggcacgctgaacagtcgggtggcgacacctcaggcgctg
tatggcttgctgctcgggttggccggcgcctggtcggcgctcgatccattggccggtgtt
ccggcattcgctcctttggattttcttgagttgcagcgcggctatgaggcggtgctcgac
tggctggaaaagaccctcgaactgatccgcgccggttatcgcagcctggcattcgaacgc
aacgaacagttcttctcgattcaattgcccgacgaccagccgagccaacgactagtcatc
ggtttgcgcatgcccaacggtgccagcgagcaggccgcgagcgaatggttgcgcggggcg
atcattgcgtcgcagccgcacattgcgatgctcagtcgccagcgcatgagcggcctgtcc
catcaggccatgagtcgcaatgaacaagtggcctacagcgtcggcgacgatacgcggttg
tttgtggtgacggccgaaggccaatggttcgacgggcagttgccgttgctgattgccgca
ccggcttcgaagctggccagcagtccatggcaagtggtgttgtttgtggcccaggcgagt
gaaagtgcttga
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