Pseudomonas cucumis: PSH97_12895
Help
Entry
PSH97_12895 CDS
T09632
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcuc03400
]
PSH97_12895
DNA repair and recombination proteins [BR:
pcuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSH97_12895
Archaeal homologous recombinant proteins
PSH97_12895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
AAA_15
ABC_tran
nSTAND3
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLG87360
LinkDB
All DBs
Position
complement(2807168..2810809)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIGTGDPRTLLRRGTGEGYAEVDFVGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKAQLEAALGLNFEQFTRAVMLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLSPEARAELDERF
NDAQQQLKTQQAQLKQLELQHTWLKDLHQLQDAQQSATEQLHSAQQHWNSLAGERLKLTR
LEQLAPQRHQFARKTELTAQLTPLAAQIQQHTQQQSELTERQTQLEQSLSTAQTALTQAQ
SQHTSSAPLLRQAFEEQSTLARLVKDASLSADLKQQAEQACIQGQGTIQGLLDQQKQVAE
RLQRIAVELEQSTHLAPLSDAWNAYRDRLQQLMLIGNRLNKGQAELAALEQSAARAAEEL
ATQRQSLEVLYKEAGAEPEAVAEQIQILGNLLQDNRKQLRAFEELTRLWASQQELDKRGA
ELQQRQLAAQQDRDRLTQDGVKTKAELSVAEQTLTVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSPDHPYHQPEALLQSLGRHDESEQANAQKAVDLLKEKLTDLRAEVGGLIAQ
QKELLQQQEQLASQQQGLTPSLEAHPLSAQLLDQDASKRDTWLTQQSSQLNQSITQDEQR
QTALLTLQQDAARLAQQLRSAEAASQQATQHLLNQQRELSSDRQRLDEELKAFSPLLPAD
TLEALRNEPAATFMQLDRQIAQRLEQLDQQRDELGEQQQRQQTLDKEQYQQQTRILQLDA
AQQQFAALAGQQQACQEKLTQLLGEHASAEQWQQQLDQAVEQARSAEATANQQLQTVRTR
LVQLAAELKAQQERSQALETEDRELSAKIADWRSQHPELDDGGLEELLDVDDQQVSELRQ
RLQQSEKAIEQAKVLLQERDQRLLVHQAQHNGNLDAEQLATTLAELQNLFAASEHHCAEL
RAEQAEDQRRQNANQALAQQIADAYTEYQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
HRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgcgatccgcctgaaaaacctcgcctcgctggccgggccgtttgaaatc
gacttcactgcggagcccttggccagtgccggcctgttcgcaattaccgggccgaccggc
gctggcaaaagcaccctgctcgacgccctgtgcctagcgctgtttggcgccgtgccgcgc
ctgaacaacaccggccgcgatgccaaggtcccggacgccgatggtgaaatcggcaccggc
gacccgcgcacactgctgcggcgtggcaccggtgaaggttatgccgaagtcgatttcgtc
ggtatcgacggtcgccgctatcgcgctcgctgggaggctaatcgcgctcgggaaaaggcc
ggtggcaagctgcaagccagccgccagagcctgcgtgacatcgatcaggatcaactgctg
gccagccagaaaggcgaatacaaagctcagctcgaagccgcgctgggcctgaacttcgaa
cagttcacccgcgccgtcatgctggctcagagcgagttcagcgccttcctcaaggctgat
gataacgaccgcagcgaactgctggaaaagctcaccgataccgcgctctatacccgtctc
ggtcgtcgcgcttttgacaagaccaaagaagctcgcgaagcccacaagttgttgcaggac
caggccaccggggtcacgccgctgtcgccggaagcccgggccgaactcgatgagcgcttc
aacgacgctcagcagcaactcaagacccagcaagcgcagctcaaacagctggagctgcaa
cacacctggctcaaggacctgcaccagttgcaagacgcgcaacaaagcgccaccgagcaa
ctgcactccgcccagcaacactggaacagcctagccggtgagcgcttgaagctcacccgt
ctggagcaactggccccgcaacggcatcagttcgcgcgcaagaccgaactcaccgcccaa
ctcacgcctctggcggcgcagattcagcagcacacgcaacagcaaagcgagctgaccgag
cgacagactcaactcgaacagagcctgagcaccgcccaaacggcgttgacccaagcgcaa
agccaacacacctccagcgcgccactgctgcgccaagccttcgaagagcaaagcaccctc
gcccgcctggtcaaggacgccagcctcagtgccgacctcaagcagcaggcggaacaggcc
tgcattcagggtcagggcacgattcagggtttgctcgaccaacaaaaacaggtcgccgaa
cggttgcagcggattgccgtggagcttgagcagagcacccatctggcgccgttgagcgat
gcctggaacgcctaccgtgatcgcctgcaacaattgatgctgatcggtaatcgcctgaac
aagggccaggccgaactggccgccctggagcaaagcgccgcccgcgccgccgaggaactg
gccacccagcgccagagccttgaggtgctgtacaaagaggccggcgccgagcctgaagcg
gtggccgagcagattcagattctcggcaatctgctgcaagacaaccgcaagcaactgcga
gcctttgaagagctgacgcgactgtgggccagccagcaggaactggacaagcgcggcgcc
gagcttcagcagcggcaactcgccgctcagcaagaccgcgatcgtttgactcaggacggg
gtgaagaccaaggccgaactgagcgtcgccgaacagaccctgaccgtcacccgcgaactg
ctggagcgtcagcgtctggcgcgcagtgccagcgtcgaagaattgcgcgcacagttgcag
gacgatcagccgtgcccggtttgtggtagcccggaccatccttatcatcagcccgaagct
ctgctgcaaagcctcggccggcatgatgaaagcgaacaggccaacgctcaaaaagcggtg
gacctgctcaaggaaaaactcaccgatttgcgcgccgaagtgggcggtttgattgcccag
caaaaagaactgctgcaacagcaagaacaactcgcgagtcagcaacaaggcctgacgccg
agcctggaagcgcacccactgtccgctcaactgttggaccaggacgcaagcaaacgcgat
acctggctgacccaacaaagcagccagttgaaccagagcatcacccaggacgaacaacgg
caaactgccttgctcaccctgcaacaggatgccgcgcgccttgcgcaacaactgcgcagc
gccgaagcggcgagtcagcaagcaacacagcacctgctcaaccagcaacgcgagttgagc
agcgatcgccaacgtctggacgaagaactgaaggcgttcagccccctgctcccggccgac
acgctggaggccttgcgcaacgaacccgccgcgaccttcatgcagctcgaccggcagatc
gcccagcgcctggaacagctcgaccagcagcgcgatgaactcggcgaacagcaacaacgc
cagcagacgctggacaaagaacagtaccaacagcagacccgcattctgcaactggacgcg
gcgcaacagcagttcgcggcgctggccgggcagcaacaggcttgccaggaaaaactgacg
caactgctgggcgaacatgccagcgccgaacagtggcagcagcaactggatcaggccgta
gagcaggcgcgtagtgccgaagcaacggccaatcagcaattgcaaaccgtacgcacgcgc
ttggtgcaactggccgccgaactcaaggctcagcaagaacgttcgcaggccctggaaacc
gaagatcgcgagctgagcgccaagatcgccgactggcgctcgcagcatccagagctggac
gacggtggactggaagagctgttggacgtcgacgaccaacaggtcagcgaactgcgtcaa
cgattgcagcagagcgaaaaagccatcgagcaagccaaggtgctgttgcaagagcgcgat
cagcgtctgctcgttcatcaggcgcagcacaacggcaatctcgatgccgaacaactggcc
acgacgctggcagagctgcaaaacctgttcgcagccagcgagcaccactgcgccgaattg
cgtgccgaacaggccgaggatcagcgtcggcagaacgccaatcaggcgctggcgcaacag
atcgccgacgcctacaccgagtatcagcgctgggcgcggttgaatgcgctgatcggttcg
gccaccggcgacaccttccgcaaaatcgcccaggcctacaacctcgatttgctggtgcat
cacgccaacgtccagttgcggcaactggtgcggcgttatcgcctgaaacgtggcggcagc
atgctcgggttattggtgatggacacggaaatgggcgatgaactgcgctcggtgcattcg
ctgtccggcggcgagacgttcctggtgtcgctggcgttggcgctcggtttggcgtcgatg
gcgtcgagcacgctgaaaatcgaatcgctgtttatcgacgaaggcttcggcagtctcgat
ccggaatccctgcaactggccatggacgccctcgatggtttgcaagcgcagggccgcaag
gtcgcggtgatttcccacgtgcaggaaatgcatgaacggattccggtacagattcaggtc
caccgccaaggcaatggcctgagtacgctggaggtgaaatga
DBGET
integrated database retrieval system
