Pseudomonas cucumis: PSH97_12900
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Entry
PSH97_12900 CDS
T09632
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcuc03400
]
PSH97_12900
DNA repair and recombination proteins [BR:
pcuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSH97_12900
Archaeal homologous recombinant proteins
PSH97_12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Sulfolobus_pRN
Motif
Other DBs
NCBI-ProteinID:
WLG87361
LinkDB
All DBs
Position
complement(2810806..2812050)
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AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLKLDQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLLPLPDASGEIAAWCLALPFLRPAEVTGAHLGDNYLRGIGQVHEWLIEAANAKRKPG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYCGSPIPLSFSEINYQHQILDIQLDGETLVSVEPRLIPRSVHLQRLGCAPLAEILLQL
ADLPNIDLLADIQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIAAEYAGNGSRE
GIDDNTTLIELDQLSPQELFSRAWQDNYGSEVDEQTLKDFAELLQDVQMESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcaccttgggcagaacctgcacggccaggagcgc
gatttcgagcacgcctgctttcttgactggctgctgcgtcagctgaaactggatcagccc
gatgtgctgctgatcgccggcgatatctttgacacggtcaacccaccggtcaaagcccag
gaacgcctctacgatttcatcgtcagcgcccatgagcagcaacccttgctgaccatcgtg
atgatcgccggcaaccatgactccggctcgcgaatcgaactgcccgcgccgctgatgcgg
cgcttgcgtactcacgccctcggtcgcgtgctgtggctcgatgacggtcaactggatgcc
gaacgcctgttgctgccgttgcctgatgccagcggcgaaattgccgcctggtgtctggcg
ctgccgttcctgcgccccgccgaagtgaccggtgcgcatttgggcgataactacttgcgc
ggcatcggccaggttcatgaatggctgatcgaagcggccaacgccaagcgcaagccgggc
caggcgctgatcgccatcagccatgcgcacatggctggcggttcggtttcggaagattcc
gaacgcagcctgatcatcggcaacgccgaagccctgcccgccagtctgttcgggccgagc
atcagctatgtcgccctcgggcatttgcacaagccgcagaaggtcaatggtgaagagcgc
atccgctattgcggctcgccgattcccttgtcgttctccgagatcaattaccagcatcag
attctcgacattcagctcgatggcgaaacattggtcagcgtcgaaccgcgcctgattccg
cgttccgtccacttgcaacgcctcggctgcgcgccgttggcggagatcctgctgcaactg
gccgacctgcccaacattgacctgctcgccgatatccagcgtcagccgtggctggaagtg
cgggtccgtctcgacgagccgcaaccggacctgcgccatcaagtggaaaccgccctgcaa
ggcaaagccgtgcggttggtgcggatcgctgccgagtacgccggcaatggcagccgcgag
ggcatcgatgacaacacaaccttgatcgaactggatcaactttcgccccaggaactgttc
agccgagcgtggcaggacaattacggcagcgaggtcgacgagcaaacgctcaaggacttc
gccgagctgttgcaagacgtgcagatggagagcgaacagccatga
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