Pseudomonas cucumis: PSH97_15560
Help
Entry
PSH97_15560 CDS
T09632
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc01501
beta-Lactam resistance
pcuc02020
Two-component system
Module
pcuc_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH97_15560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSH97_15560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcuc02000
]
PSH97_15560
01504 Antimicrobial resistance genes [BR:
pcuc01504
]
PSH97_15560
Transporters [BR:
pcuc02000
]
Other transporters
Pores ion channels [TC:
1
]
PSH97_15560
Antimicrobial resistance genes [BR:
pcuc01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PSH97_15560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
WLG82554
LinkDB
All DBs
Position
3430024..3431364
Genome browser
AA seq
446 aa
AA seq
DB search
MNIAKQSSLSLAVIAATAQLAIAGQQQQANGFIEDSSLGLLNRNFYMNRDFRNGGSNSQG
INGSKPSSERNGYREEWAQGAMLNFASGFTQGTIGFGTDAFAYGGVKLDTGRGRAGNGLL
PISNNRTADANVPDAYGEIGGAVKMRISSTVLKYGEQRPTAPVFATGDNRLLPETATGFQ
LTSNEFDALSFEGGHFTAFNNRNSTNSDDGLFTTYGGTEADSVDFIGGTYKINENLSLKA
YTSEAVNVWRQHFASASYTIPLADKQSLNFGLTAYKTKDQGDARAGKLDTTSWSAKAAWS
IGAHKVTLAYQKIDGDEYFDYIGVDSIWLANSVQYSDFNAPNERSIQARYDLNMATFGIP
GLSFMARYVKGDQIDGTKADPNGAYANTVGDDQKEWERDLEAKYVIQEGTAKDLSFRLRQ
ATHRSTSFDSDIDEVRLIIEYPLSIL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgcaaaacaaagctctctctccctggctgtcattgccgccaccgcgcaactg
gcaatagcgggtcagcaacagcaagccaacggcttcatcgaagacagcagcctggggctg
ctcaatcgtaatttctatatgaaccgcgacttccgcaatggcggcagcaatagccagggg
atcaacggctccaagccgtccagcgagcgcaacggctatcgcgaggagtgggcacagggt
gccatgctcaacttcgcctccggtttcacccagggcaccattggctttggcaccgatgcc
ttcgcctacggcggggtcaagctggacaccggccgtggccgggctggcaacggcctgttg
ccgatcagcaacaaccgcaccgccgatgccaacgtgccagacgcctacggcgagatcggc
ggcgcagtgaagatgcgcatttcctccaccgtgctgaagtacggcgaacaacgcccgaca
gcgccggtattcgccaccggcgacaaccgtttgctgccggaaaccgctaccggctttcag
ctgacgagcaacgaattcgatgccttatcctttgagggcggccatttcaccgcattcaac
aatcgcaattcgaccaactctgatgatgggctgttcaccacatacggagggaccgaagct
gacagcgtcgacttcatcggcggcacctataaaatcaacgaaaacctcagtctgaaggcg
tacaccagtgaggccgtcaatgtctggcgtcagcatttcgccagcgcctcctatacgatt
cccctggctgacaagcagtcgctgaactttggtttgacggcctataagaccaaggaccaa
ggtgacgcccgtgccggcaaactggacaccacgagctggtcggccaaggcggcctggtcc
atcggcgctcacaaggtcaccctggcctatcagaagatcgatggcgacgagtatttcgac
tacatcggggtggactcgatctggctggccaactcggttcagtactccgacttcaacgcc
cccaacgagcgctccatccaggctcgttatgacctgaacatggctacgttcggcataccg
gggctgagctttatggcccgctatgtcaaaggtgatcaaatcgatggcaccaaagccgat
ccgaacggtgcctatgccaacacggtgggtgacgaccagaaggagtgggagcgtgacctg
gaagccaaatacgtgatccaggaagggaccgccaaggacttgtccttccgcctgcgccaa
gccacccatcgctccacctcgttcgacagcgatatcgacgaggtccgcctgatcatcgag
tacccgctgagcattctgtaa
DBGET
integrated database retrieval system
