Pseudomonas cucumis: PSH97_17800
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Entry
PSH97_17800 CDS
T09632
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSH97_17800 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcuc03019
]
PSH97_17800 (groL)
03110 Chaperones and folding catalysts [BR:
pcuc03110
]
PSH97_17800 (groL)
03029 Mitochondrial biogenesis [BR:
pcuc03029
]
PSH97_17800 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcuc04147
]
PSH97_17800 (groL)
Enzymes [BR:
pcuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSH97_17800 (groL)
Messenger RNA biogenesis [BR:
pcuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSH97_17800 (groL)
Chaperones and folding catalysts [BR:
pcuc03110
]
Heat shock proteins
HSP60 / Chaperonin
PSH97_17800 (groL)
Mitochondrial biogenesis [BR:
pcuc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSH97_17800 (groL)
Exosome [BR:
pcuc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSH97_17800 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PSH97_17800 (groL)
Exosomal proteins of breast cancer cells
PSH97_17800 (groL)
Exosomal proteins of colorectal cancer cells
PSH97_17800 (groL)
Exosomal proteins of bladder cancer cells
PSH97_17800 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
WLG82972
LinkDB
All DBs
Position
3938625..3940241
Genome browser
AA seq
538 aa
AA seq
DB search
MAHTKILFRAAAREKILSGATQLADAVRVTLGPKSKSVLIQSKWGNPTVCNDGVTIAKRI
NLLDPEENLGAQMLRQAAERTGEAVGDGTSTSTVLAHAILADGIRNVVAGASAIDLKRGM
DRGLSLVMQSLLAQSRPVSTPKEKAQVATLSAHNDAVIGQLVADALEKVGIEGVVSVEES
KTTETVVEVMEGMRLDRGYVSPYFVTDTEKMQAELDDAYLLLCDHKIGVLKDLLPLLELI
AKSGQPLVLIADDIEGEALTTLVVNQIRGVLRAVAIKAPGFGDRRKEMLQDIAVLTGATV
ISNELGINLEQVELSQLGRAHRVVVQKDSTALIGGAGKREAIEARLQQIRVQMDNTTSDY
DREKLQERLARLSGGVAVIRVGAPSESEMKARKDALDDAISATRAAIAEGIVPGGGLALL
KAVPMIAAEEANHEGDVKTGLQILRRALEAPARFIAENSAVDAGVVIARMLAESGNVGFD
AAANSYVDMYEAGIIDPTKVVRIALENAVSVASILLLTEATMTDIPEKESPAQPPFPE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcccacacaaaaatcctgtttcgtgctgccgctcgcgagaaaatcctgagtggagcc
acacaactggcggacgctgtccgggtgaccctgggaccgaaatcgaaatcggtgttgatt
cagagtaaatggggcaatccgacggtctgcaatgacggcgtgacgattgccaaacggatc
aacctgctggaccccgaggagaatctgggtgcgcaaatgctgcgtcaggcggcggaacgc
accggcgaggccgtcggggacgggaccagcacatcgacggtgctggcccatgcaatcctg
gctgacggcatccgcaacgtcgtcgccggtgccagtgcgatagacctcaagcgcggcatg
gaccgggggctttctctggtcatgcaatcgctgctggcgcaatcgcgcccggtcagcaca
cccaaggaaaaggcccaggtcgccacgctttcggcccataacgacgcggtcatcggtcaa
ctggttgccgacgctctggaaaaggtcggcattgaaggtgttgtcagtgtcgaagagtcc
aagaccaccgaaacagtggtcgaggtcatggaagggatgcgcctggaccgtggttatgtc
tcgccctacttcgtgaccgataccgagaagatgcaggccgaactcgacgatgcctacctg
ctgctctgtgaccataagatcggcgtgctcaaagacctgctgccattactggaactgatt
gccaaaagtggccaaccactggtcctgatcgccgacgacatagagggtgaagcgttgacc
actttggtggtgaaccagattcggggggtattgcgcgcggtggcgatcaaggcgccgggc
ttcggtgatcgacgcaaggaaatgcttcaggacattgccgtactgaccggcgcaaccgtg
atctccaatgagctggggatcaacctcgaacaggtggaattgagccagttggggcgggct
catcgagtcgtggtgcagaaagacagcacggcgctgattggcggcgcgggtaaacgcgaa
gctatcgaggcgcgcctgcaacagatccgcgtgcaaatggacaacaccaccagcgattac
gaccgggaaaaacttcaggaacgcctggccaggctgtctggcggcgtggcggtgatccgc
gtcggcgcgccttccgaatctgaaatgaaagcgcgcaaggatgcactggacgatgcgatt
tccgcgacccgggcggcgatcgccgaaggcattgttccagggggcggtctggccctgctc
aaagccgtgccgatgattgcagccgaagaagccaaccatgagggcgatgtcaaaaccggc
ctgcagattctgcgtcgggctctggaagcaccggcgcggttcatcgctgaaaactcggcg
gtggatgccggcgtggtcatagcccgcatgctcgccgaatcgggcaacgtgggcttcgat
gcggcagccaatagttatgtggacatgtacgaagccggcatcatcgacccgaccaaggtg
gtgcgcattgccctggaaaatgccgtgtcggtcgccagtatcctgctgctcaccgaggcg
accatgacggatattccggaaaaggaatcgcctgcccagccaccgtttcctgaatga
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