Pseudomonas cucumis: PSH97_18180
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Entry
PSH97_18180 CDS
T09632
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcuc03000
]
PSH97_18180
Transcription factors [BR:
pcuc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PSH97_18180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_38
MerR
DUF3853
SQAPI
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WLG83036
LinkDB
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Position
4007500..4008501
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AA seq
333 aa
AA seq
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MSNIREVARLAGVSVATVSRTLKSPERVLPETRDKVNAAVEQAGYRPNLMAVQFRSRRTG
NLVILVPAIANTFFARVISGAQQAAQAAGYRLLLCDTQGREEIEREFAALVYAHQADGVI
QLRAYDPFESPFPHGESLPLVNACEVIQGGRHPTISLDNRAAAKAMTEHLIDLGHRRIGL
IKGPKSSPLTRDRVAGYQDALHQAGIESDPQLICHGDFTLKAGFDGAGMLLELPDRPTAF
FCENDEMAIGALKRIKQQGLRVPDDISLVGFDDIPFAAYCDPALTTIAQPAEIFGQKAVE
MLIALIEKKPIPDRHVVLPFTLTVRNSTTARKG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaatatccgtgaagtagcccggctggccggcgtctcggtggccaccgtgtccaga
acgctgaagtcgcccgagcgcgtactccccgaaacccgagacaaggtcaacgcagccgtg
gaacaggccggctaccggccgaacctcatggccgtgcagtttcgttcgcgcagaaccggc
aacctggtgattctggtcccggccatcgccaacacgtttttcgcacgggtgatcagcggt
gcccaacaggcggcacaggcggccggttatcgactgttgttgtgcgacacccagggtcgc
gaggaaatcgaacgggaatttgccgcgctggtgtacgcccaccaagccgacggcgtgatt
cagttgcgcgcctacgacccgtttgaatcgcccttcccgcatggcgagtcactgcctttg
gtcaatgcctgcgaggtgattcaaggcgggcggcatccgacgatcagcctcgacaaccgg
gcggcggccaaggccatgacggagcatttgatcgatctgggtcatcgccggatcggcctg
atcaaaggcccgaaaagcagcccgctcacacgcgaccgtgtggccggctatcaagatgca
ttgcatcaggccggtatcgagtcggacccacaattgatctgccacggggacttcacgttg
aaggccggttttgatggtgcgggaatgctgctggaactgcccgaccgtccgaccgcgttc
ttttgcgaaaacgatgaaatggcaatcggtgcattgaagcgcatcaaacaacaaggtttg
cgggtacccgacgatatttcgttggtcggcttcgatgacattccattcgcggcctactgt
gatccggcgttgacgaccatcgcgcaacccgccgaaatctttggccaaaaagccgttgaa
atgctgatcgccctcattgaaaaaaagcccatcccggaccgccatgtggtgctgccgttc
acattaaccgtgcgtaacagtacgaccgcccgaaagggatga
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