Pseudomonas cucumis: PSH97_19410
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Entry
PSH97_19410 CDS
T09632
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc00550
Peptidoglycan biosynthesis
pcuc01100
Metabolic pathways
pcuc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSH97_19410 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSH97_19410 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcuc01011
]
PSH97_19410 (mrdA)
Enzymes [BR:
pcuc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSH97_19410 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcuc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PSH97_19410 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WLG83270
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All DBs
Position
complement(4297495..4299387)
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLMACALFVVAITCALVVRLYVLQVVEYDYHSTISENNRVH
VLPIAPTRGLIYDRNGVLLADNRPSYNLTITRERASDVKEELDDVVNLLHLPAEDRTLFD
KAMKQARHPFVPVTLFYELSEEQIAVLAANEFRLPGIDVEPQFVRHYPMGAHFAHSIGYV
GRINEKESKALDTVEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTD
PVPGKNIVLSLDVKLQEAAEEALGDRRGSVVALDPSTGEVLAMVSKPSFDPNMFVTGISF
KEYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTAQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESAGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGLAPVDEHPMPNILLKDPHDWEQVNHGMQMVMHDAHGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNRAKTPERNRDNALFVGFAPAEHPKIVISVMIENGEAGGRVAGPVVR
KIMDAWLLDQDGHLKPQYAVPSKAPGDSHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccgataccaatcaaggaccacgaaaaagagacgcgcctggtcaacaaaaga
ctgatggcctgcgccttgttcgtcgtcgctattacctgtgcgctggtggtgcggctgtat
gttctgcaggtggtcgaatacgactaccactcgacgatctccgaaaacaaccgtgtacac
gtattgccgattgcccctacccgcgggttgatttatgaccgcaacggtgtgcttttggcg
gataaccgacccagttacaacctgaccatcacccgcgaacgcgcctccgatgtcaaagaa
gagttggatgatgtagtcaacctcctgcacttgccggctgaagaccgcacgctgttcgac
aaggcgatgaagcaggctcgacatcccttcgtgcccgtcaccttgttctatgaactcagc
gaagaacagatcgcggtgttggcagccaacgaattccgtttgccagggatcgacgtagag
ccacagttcgttcgccactacccgatgggcgcacacttcgcacactcgatcggctacgtc
ggccgcatcaacgaaaaagaatccaaggctctggatacggtggaataccgtggcacccaa
tccattggcaagaccggcatcgagagattctacgagtccgagttacacggccatgtgggt
tatgaagaagtcgagaccaacgctcagggccgcgtgctgcgagtgctcaaacacaccgac
ccggtccccggtaaaaacatcgtactgagcctcgacgtcaaacttcaggaagcagccgag
gaggcgttgggtgatcgccgtggctcggtggttgctctcgacccgtcgaccggtgaagtg
ttggccatggtcagtaagccaagcttcgacccgaacatgttcgtgacaggcatcagcttc
aaggaatacgcggcgctgcacgattctatcgaccggccgctgttcaaccgcgtgctgcgg
ggactctacgcgcccggttcgaccatcaagcctgaagtggccattgccggcctcgacgcc
ggggtggtcactgcgcagactcgcgtcttcgatccgggttattaccagctaccggatttc
gatcataaataccgtaactggaaccacagcggcgatggttgggtggacatggacgcggcg
atcatgcgctccaacgacacctatttctacgacctggcgcacaagctgggtatcgatcgc
ctgcatgactacatggccatgttcggtctcggcgagaaagtctcgctggacatgttcgaa
gagtctgcggggttgatgccatcccaggcctggaaacgcgctacacgccgtcagccgtgg
ttccccggcgagacagtgatcctcggcatcggtcagggatacatgcaggtcacgcccctg
cagctggcccaagccaccgcgctgatcgccaacaaaggtgtgtggaaccgaccacacctg
gccaaaacagtggatggcctagcgccggtggacgagcatccgatgccgaacatcctgctc
aaggacccgcatgactgggagcaggtcaatcacggcatgcagatggtgatgcacgatgct
cacgggattgcccgagcggcagcggccggggctcagtaccgcatcgccggcaagagcggg
accgcgcaagtggtggcgatcaagcagggtgaacgctacaaccgggcgaaaactccggag
cgcaaccgtgacaatgccttgttcgtcggtttcgccccggccgaacatccgaaaattgtc
atctcggtcatgatcgaaaacggcgaggccggaggtcgcgtcgccggtcccgtagtacgg
aaaatcatggacgcctggttgctcgatcaggatggtcacctgaagcctcaatacgccgtg
ccgagcaaagcaccgggcgattctcacgtctaa
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