Pseudomonas cucumis: PSH97_20185
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Entry
PSH97_20185 CDS
T09632
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc00521
Streptomycin biosynthesis
pcuc00523
Polyketide sugar unit biosynthesis
pcuc00525
Acarbose and validamycin biosynthesis
pcuc00541
Biosynthesis of various nucleotide sugars
pcuc01100
Metabolic pathways
pcuc01110
Biosynthesis of secondary metabolites
pcuc01250
Biosynthesis of nucleotide sugars
Module
pcuc_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSH97_20185 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PSH97_20185 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PSH97_20185 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PSH97_20185 (rfbB)
00525 Acarbose and validamycin biosynthesis
PSH97_20185 (rfbB)
Enzymes [BR:
pcuc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PSH97_20185 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
DUF6301
Motif
Other DBs
NCBI-ProteinID:
WLG83413
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All DBs
Position
complement(4470629..4471705)
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AA seq
358 aa
AA seq
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MKILVTGGAGFIGSAVIRHIISNTNDSVVNVDKLTYAGNLESLAEVSQNSRYVFERVDIC
DRDQVDRVLREHQPDAIMHLAAESHVDRSISGPSEFIQTNIIGTYTLLEAARHYWAALDD
ARKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP
TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPVYGKGNQVRDWLYVEDHARALYKVVT
EGVIGETYNIGGHNEKQNIEVVHTLCALLDELRPDSAHRPHASLITYVQDRPGHDQRYAI
DASKIQRELGWTPEETFETGIRKTVEWYLNNTEWVAHVKSGSYQQWIDQNYTDRSDKA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattctagtaaccggcggcgccgggtttatcggctcggcagtcattcgtcatatc
atctccaacactaacgactctgtcgttaacgtcgataaactgacttatgccggtaatctt
gagtcgctggccgaagtcagccagaactcgcgttacgtgttcgaacgcgtcgacatctgc
gaccgtgaccaagtggaccgtgtcctgcgtgaacaccaaccggatgcgatcatgcacttg
gccgcagagtcccacgttgaccgctcgatctccggtccgtctgaattcatccagaccaac
atcatcggcacatacaccttgctcgaagcagcacgccattattgggcggcactggatgac
gcgcgtaaagccaacttccgtttccaccatatttccaccgacgaagtctatggagacctc
gaaggtccggaagacctcttcaccgaaaccacgccgtaccagccaagctcgccgtactcg
gccagcaaggccagttccgatcacctggttcgcgcctggagccgtacctacggcctgccg
actctggtgaccaactgctcgaacaactacggtccgtgccatttccctgagaagttgatc
ccgctgatcattcttaatgcactggaaggcaagccgctgccggtctacggcaaaggcaat
caggtccgtgactggctctatgtcgaagaccacgcccgcgcgctctacaaagtcgtgacc
gaaggcgtaatcggcgagacctacaacatcggcggccataacgagaagcaaaacatcgaa
gtggtgcatacactttgcgcactgctcgacgaactgcgtccagactccgctcatcgtccg
catgccagcctgatcacctacgttcaggatcgcccgggccacgaccagcgctatgcgatc
gacgccagcaagattcagcgtgagctgggttggacgccggaagaaacttttgaaaccggt
atccgcaagaccgtcgagtggtacctcaacaacactgagtgggtagctcacgtgaagagc
ggcagctaccagcaatggatcgaccagaactacacggatcgttcggacaaagcatga
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