Pseudomonas cucumis: PSH97_21205
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Entry
PSH97_21205 CDS
T09632
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc00061
Fatty acid biosynthesis
pcuc00071
Fatty acid degradation
pcuc01100
Metabolic pathways
pcuc01212
Fatty acid metabolism
pcuc02024
Quorum sensing
pcuc04146
Peroxisome
Module
pcuc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSH97_21205 (fadD1)
00071 Fatty acid degradation
PSH97_21205 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSH97_21205 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSH97_21205 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcuc01004
]
PSH97_21205 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcuc04147
]
PSH97_21205 (fadD1)
Enzymes [BR:
pcuc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSH97_21205 (fadD1)
Lipid biosynthesis proteins [BR:
pcuc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSH97_21205 (fadD1)
Exosome [BR:
pcuc04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSH97_21205 (fadD1)
Exosomal proteins of breast cancer cells
PSH97_21205 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
WLG83606
UniProt:
A0ABY9ETP9
LinkDB
All DBs
Position
complement(4679032..4680732)
Genome browser
AA seq
566 aa
AA seq
DB search
MIEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAELVVPKTGVKHVIVTEVADLLPPLKRLLVNSVIKYVKKMVPAYH
LPKAIKFNDVLRKGHGQPVAEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLTAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSSLKITLSGGMALQLAAAERWKAVTGCPICEGYGM
TETSPVATVNPSQNIQIGTIGIPVPSTLCKIIDDAGVEQPLGAIGELCVKGPQVMKGYWQ
RQDATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKEQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGVKKVSA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtacccagctggaattgctgccgagatcaatcca
gacgagtatccgaatattcaggcagtgttgaagcagtcctgccaacgcttcgctgacaaa
ccggcattcagcaacctgggcaagacaatcacctacggtgagctgtacgaattgtccggt
gcctttgccgcttacctgcaacagcataccgatttgcagcccggcgatcgaatcgccgtg
caactgcccaatgtgttgcagtatccggtcgccgtcttcggtgccatccgcgccgggctg
atcgtggtcaacaccaacccgttgtacaccgcgcgggaaatggaacaccaattcaacgac
tccggcgccaaagccttggtctgcctggcgaatatggcgcatttggccgagctcgtggtg
ccgaagactggcgtcaagcacgtgatcgttactgaagtggccgacctgttgccaccgctc
aagcgtctgctggtcaacagcgtgatcaagtacgtgaagaagatggtcccggcgtatcac
ttgcccaaggccatcaaattcaatgacgtgctgcgcaagggccatggccagccagtggct
gaagccaacccggccagcagcgacgtcgccgtgctgcaatacaccggcggtaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctcgtggcgaacatgctgcagtgcaag
gcgctgatgggctccaacctcaacgaaggttgcgagattctgatcacgccgctgccgctg
taccacatctatgcgttcacctttcattgcatggcgatgatgttgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgacggcgatggtcaaggaactgtcgaagtggaag
ttcagcggtttcgtcggcctgaacacgctgttcgtcgcgttgtgcaacaacgaagcgttc
cgcaagctggatttctccagtctgaaaatcaccctgtccggcggcatggccttgcaactg
gccgcggccgaacgctggaaagcggtcaccggttgcccgatctgcgaaggttatggcatg
accgaaaccagcccggtggccacggtgaacccgagccagaacatccagatcggcaccatc
ggtatcccggtaccgtcgaccctgtgcaaaatcattgacgatgccggtgttgaacagccg
ttgggcgccatcggtgaattgtgtgtgaaaggtccgcaagtcatgaagggctactggcaa
cgtcaggacgccactgatgaaatactcgacagcgaaggctggttgaagaccggtgacatc
gcgctgatccagcctgacggttacatgcgcattgtcgatcgcaagaaagacatgatcctg
gtctccggtttcaacgtgtaccccaatgaacttgaagacgtgctggcgaccctgccgggc
gtgctgcaatgcgcggccatcggtgtgccggacgagaagtcgggcgaggcgatcaagatt
ttcatcgtcgccaaaccgggcgtgaccctgactaaggaacaggtgatggagcacatgcgc
gccaacgttaccggctacaaagtgcccaaggccgtggaattccgcgacgcgctgccgacc
accaacgtcggcaagattctgcgccgcgaactgcgcgacgaagagctgaagaaactgggc
gtgaagaaagtcagcgcctaa
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