KEGG   Pseudomonas cucumis: PSH97_21880
Entry
PSH97_21880       CDS       T09632                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pcuc  Pseudomonas cucumis
Pathway
pcuc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcuc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSH97_21880
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcuc02022]
    PSH97_21880
Two-component system [BR:pcuc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PSH97_21880
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA FleQ Mg_chelatase MCM AAA_2
Other DBs
NCBI-ProteinID: WLG83724
LinkDB
Position
4827293..4828618
AA seq 441 aa
MLNSVMVVDDESSIRSAVEQWLSLSGFEVQLFSRADECLAQLPKHFPGVILSDVRMPGMT
GLELLAEVQRRDVDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPETLLSSLRRALDK
RRLVLENRALHEQADNRAKLDATLLGVSRGLQTLRRQVLDLATLPVNVLIRGETGSGKEL
VARCLHDFGPRADKPFVALNCAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYADGGTL
FLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIHVDLRIIAATKPDLLDEARAGRFRED
LAYRLNVAELRLPPLRDRREDIPLLFEFFAQSAAERLGRTFAPLSGPQLSHLLSHDWPGN
VRELANVAERQVLGLGEPEPAGIDPGQSLAAQQEAFEAHCLRAALTRHKGDVKAVLEELQ
LPRRTFNEKMQRHGLTREMFI
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgctcaattcggtgatggtggtcgatgacgaaagcagcatccgcagcgctgtcgaacag
tggctgagcctgtcggggttcgaggtgcagctgttcagtcgcgcagatgagtgcctggcg
caactgccgaagcatttccccggggtgattctcagcgacgtgcgcatgcctggcatgacg
gggctggaactgctggccgaagtccagcgccgcgatgtcgacttgccggtgatcttgctg
accggtcacggcgatgtgccaatggccgtcgaagcgatgcgcgacggtgcttatgatttc
ctcgaaaaacctttcagcccggaaaccctgctgagcagcctgcgccgcgctctggacaag
cgccggctggtgctggaaaaccgtgccctgcacgagcaggcagacaatcgcgccaaactc
gatgccactctgctgggggtttcccgtggcttgcagacgttgcgtcggcaagtgctggac
ctggcgacgttgccggtcaatgtgctgatccggggcgaaaccggcagcggcaaggaattg
gttgcccgttgcctgcacgacttcggtccccgcgcggacaagccctttgtggcgctaaat
tgcgcagcgattcccgagcagttgttcgaggccgaactgttcggccatgagagtggcgcg
ttcacgggcgctcagggcaaacgcatcggcaagctcgaatacgccgacggcggcacgctg
tttctcgatgaaatcgaaagcatgccgctggcccaacaggtgaaattgctgcgggtgttg
caggagcagaagcttgagcgattgggttccaaccagagcatccacgtagatttgcggatc
atcgccgcgaccaaacccgacttgctggatgaagcccgggccggacgttttcgcgaagat
ctggcctatcgattgaacgtcgccgagctgcgcctgccgccgttgcgtgatcggcgtgaa
gacattccactgttgttcgagttcttcgcgcaaagtgccgccgagcgtttgggccgtacc
tttgcacccttgagcgggccgcaactgagccatctgctgagccacgactggccgggcaat
gtgcgcgaactggcgaacgtcgccgagcgccaagtgctgggcctgggcgaaccggaaccg
gcggggatcgaccccggccagtcactggcggcgcagcaagaagccttcgaagcgcattgc
ctgcgggcggcgttgacccggcataaaggggatgtgaaagcggtgctagaagaactgcaa
ctgccgcggcgtacctttaatgaaaagatgcagcggcatggactgacccgcgagatgttc
atctaa

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