Pseudomonas cucumis: PSH97_22580
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Entry
PSH97_22580 CDS
T09632
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcuc03009
]
PSH97_22580 (der)
Ribosome biogenesis [BR:
pcuc03009
]
Prokaryotic type
GTPases
PSH97_22580 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ABC_tran
Ras
DUF5906
AAA_24
NOG1
AAA_18
NTPase_1
SRPRB
cobW
SRP54
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
WLG83855
LinkDB
All DBs
Position
complement(4992862..4994331)
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANKV
DNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALSDFPKDDEEPEEGEEEIVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFERN
DEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYASV
QNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQIE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNSLTDRQVNKKRRMMSHHKK
ADKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccgaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgcgacgccatcgtcggcgacctgtccggtctgacccgtgatcgc
cagtacggtgaggccaagtggcaagggcgttcctacattctggtcgacaccggcggtatc
tccggtgacgagcacggtatggacgaaaaaatggccgagcagtcgctgctggccattgaa
gaagcggatgtcgttttattcctggtagatgccaaggccggttttaccgccgccgaccag
atgatcgccgagcacttgcgcaagcgtaacaagcgttcttacgtggttgccaacaaggtc
gacaacatcgaccctgaaatggcccgcgccgaattcgccccgttgggcatgggccacgcg
atcccgatcgccggtgctcatggtcgtggtatcacccagatgctggaaatcgccctcagc
gacttcccgaaagacgacgaagagccggaagaaggcgaagaagagatcgttgccgaaggt
gaggaagccaagcgcattcctggcccaagcgaaaaagacggtatcaagatcgccatcatc
ggccgtccgaacgtcggcaagtcgaccctggtcaaccgtatgctcggtgaagaccgggtt
atcgtttatgaccagcccggcaccacccgcgacagcatctacatcccgtttgaacgtaac
gacgagaagtacacgctgatcgacaccgctggtgtgcgcaagcgcggcaagatccacgaa
gaagtcgaaaagttctccgtggtcaaaaccctgcaagcgatcaaagacgccaacgtggtg
atcttcgtgatggacgcccgcgaaggcgtggtggaccacgacctcaacctgctgggcttt
gcccttgaagccggtcgtgcgctggtgatcgcgatcaacaagtgggacggcatgacgccg
agcgagcgcgacttcgtgaaggttgagctgcaacgtcgactgttcttcgttgacttcgcc
gatatccacttcatctcggccctgcacggcactggcgtaggcaacctctacgcgtcggta
cagaactcgttcaagtccgcggtcacccgctggccgaccaaccgcctgacccagattctg
gaagatgcggtcggtgagcacgcgccaccgatggtcaacaaccgccggatcaagctgcgt
tatgctcacttgggtggtgccaacccgccgatcatcgtgatccacggtaaccagatcgag
aaggttccgaagtcttacgtccgttacctggaaaacacttaccgtcgtgtgctcaagctg
gtcggtacgccgatccgtatcgagttcaagggcggcgagaacccgtacgaaggcaacaag
aactcgcttaccgaccgccaggtcaacaagaaacgccgcatgatgtcgcaccacaaaaag
gccgacaaaaagcgccgcgacaagcgctga
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