Pseudomonas cucumis: PSH97_24965
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Entry
PSH97_24965 CDS
T09632
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcuc03009
]
PSH97_24965
Ribosome biogenesis [BR:
pcuc03009
]
Prokaryotic type
ribosomal protein modification factors
PSH97_24965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
WLG84297
LinkDB
All DBs
Position
5501168..5503372
Genome browser
AA seq
734 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRSIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLMPASSSEASTYIVGKDLPLEQTIANMSAILADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANAAFVHYPDERWFKPGRKDELPTEILDEYCLKIYNRDGELRGSHLIDTNSGNEERGIC
SLPYVRQSDGEVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPADVLAKYPGILAGIQALEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDYEFVEWDFSGQGENSNAEEAATLFGILEGMGKEVYMAVYEHIGATACRILVPDY
SEIYPVDDLIWDNTNKALFFRADILNLHRLDEDELQALVERLVESELDDYTDIPTLIGIE
FDDNTAWGQLTILELKLLIYLALQRFEEAKEAVEMFLQYNDNTVERGLFYQAVNVVLEMK
LDEDLELEDYEANFRRMFGNERTDAAIGSVDGSVRFHGLTPTSMELEGLDRHLRLIDSYK
KLHMARANVTNLSR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcggcttgaagccaagttcgatgacttc
acggtggtggccgatcaacctatccgctacaagggcgatggctcggcaccaggtccattc
gactacttcctggcttcgtcggcgttgtgtgcagcttatttcgtgaagttgtactgcgac
actcgcagtattcccaccgataacatccgcctgtcgcagaacaacattgttgatccggaa
aaccgctacaaccagattttcaagattcaggtcgagttgccggcggacatctccgacaag
gaccgccagggcatcctgcgctccatcgaccgttgcaccgtgaaaaaagtggtgcaagcc
gggcctgagtttgtgatcgaagaagtcgaaaacctcgacgccgatgcccaggcgctgcta
atgcctgcgtccagttcagaggcgagcacttatatcgtgggcaaggatctgccgctggag
caaaccatcgccaatatgtcagccattctggcggacctgggcatgaagattgaaatcgcc
tcgtggcgcaatatcgtgcccaatgtgtggtcgctgcatattcgcgatgcgcactcgccg
atgtgctttaccaacggcaagggtgcgaccaaggaaggcgcgttggcgtctgcgttgggc
gagtttatcgagcgactcaactgcaacttcttctacaacgaccagttctggggcgaagac
atcgccaacgcagcgtttgtacattacccggacgaacgctggttcaagcctggccgaaaa
gatgagctgccaactgaaattctcgacgagtactgcctgaagatttacaaccgcgacggc
gagttgcgtggctcccatctgatcgataccaactcgggcaatgaagagcgcggcatctgc
tcgctgccgtacgtgcgccagtcggatggcgaggtggtgtatttcccgtccaacctgatt
gaaaacctgttcctgagcaacggcatgagtgccggtaacacgctggccgaagcacaggtg
cagtgcctgtcggagatcttcgagcgcgcggtaaaacgcgaaatcatcgaaggtgaattt
gcattgccggatgtgccggccgatgtactggcgaagtaccccgggatactggccggtatt
caggccctggaagagcaagggttccccgtgctggtgaaggatgcatccctgggcggtgaa
ttcccggtgatgtgtgtcacgttgatgaacccgcgtaccggcggtgtgttcgcctcgttc
ggcgcgcacccgagcctggaagtggcgctggaacgcagcctgaccgaattgctgcagggc
cgcagcttcgaaggcctcaacgacttgccccagccgacttttgaagggcatgcggtgacc
gagccgaataacttcgtcgagcactttatcgactccagcggcgtggtgtcgtggcgcttc
ttcagtgccaaatcggattacgaattcgtggagtgggacttctccggccagggtgaaaac
tcgaatgccgaggaagccgcgaccttgttcggcattctcgaaggcatgggcaaagaagtg
tacatggcggtctacgagcacatcggtgcaacggcctgccgcatcctggtgccagactat
tcggaaatttatccagtagacgatctgatctgggataacaccaacaaagcgctgtttttc
cgcgccgatatcctgaacctgcatcgcctggacgaagacgaactgcaagcgctggttgag
cgtctggtggaaagtgagctggacgactacaccgacatccccaccttgatcggcatcgaa
tttgacgacaatacggcttggggtcagttgacgatcctggagttgaagctgctgatttat
ctcgccttgcagcgatttgaagaggcgaaagaggcggtggaaatgttcctgcagtacaac
gacaacacggttgagcgtggcttgttctaccaggccgtcaacgtggtgctggagatgaag
ctggacgaagacctggagctggaagactacgaggccaatttccgccggatgtttggcaac
gagcgaacggatgcagcgatcggatcggtggacggcagcgtgcgtttccatggcttgacg
ccgaccagcatggaactggaggggctcgacaggcacctgcggttgatcgatagctacaag
aaactgcacatggcgcgggccaacgtgactaacttatcccgttaa
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