KEGG   Pseudomonas cucumis: PSH97_25705
Entry
PSH97_25705       CDS       T09632                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcuc  Pseudomonas cucumis
Pathway
pcuc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcuc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSH97_25705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcuc03021]
    PSH97_25705
Transcription machinery [BR:pcuc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSH97_25705
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_17 HTH_24 Sigma70_ECF Sigma70_r3 MerR HTH_29 FaeA
Other DBs
NCBI-ProteinID: WLG84430
UniProt: A0ABY9EVY6
LinkDB
Position
5650103..5650621
AA seq 172 aa
MSSVQSPQSELVGALYRDHRSWLLAWLRRNVACPQRAEDLSQDTFVRLLGRDELKAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEGEQPSVEEQQLILEDLKAIDHLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGIRQCYIALYGEPV
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcgtcagtccaaagcccccagagtgaactcgttggtgcgttgtatcgcgaccatcgc
agttggctgttggcttggctgcggcgcaatgtggcctgcccgcaaagggccgaagacctg
agtcaggacacctttgtgcgcttgctgggccgtgacgaactaaaggcgcctcgcgaaccc
cgggcatttctggtggcgatcgccaagggtctgctgttcgactacttccgccgcgccgcg
ctggaacaggcctacctcaccgagttgatgctgattcccgaaggcgaacaaccgtcggta
gaagaacagcaactgatcctcgaagacctcaaagccatcgaccacctgctgggcaagctc
tcgagcaaggcccgggcggcgtttctctataaccgtctcgacggcctcggccacgcagaa
atcgccgagcgtctgggtgtatcagtgccgcgtgttcgccaatacctggcccagggcatt
cgccagtgctacatcgcgttgtacggtgagccggtatga

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