Pseudomonas cucumis: PSH97_25705
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Entry
PSH97_25705 CDS
T09632
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH97_25705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcuc03021
]
PSH97_25705
Transcription machinery [BR:
pcuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH97_25705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_17
HTH_24
Sigma70_ECF
Sigma70_r3
MerR
HTH_29
FaeA
Motif
Other DBs
NCBI-ProteinID:
WLG84430
UniProt:
A0ABY9EVY6
LinkDB
All DBs
Position
5650103..5650621
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AA seq
172 aa
AA seq
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MSSVQSPQSELVGALYRDHRSWLLAWLRRNVACPQRAEDLSQDTFVRLLGRDELKAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEGEQPSVEEQQLILEDLKAIDHLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGIRQCYIALYGEPV
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagtccaaagcccccagagtgaactcgttggtgcgttgtatcgcgaccatcgc
agttggctgttggcttggctgcggcgcaatgtggcctgcccgcaaagggccgaagacctg
agtcaggacacctttgtgcgcttgctgggccgtgacgaactaaaggcgcctcgcgaaccc
cgggcatttctggtggcgatcgccaagggtctgctgttcgactacttccgccgcgccgcg
ctggaacaggcctacctcaccgagttgatgctgattcccgaaggcgaacaaccgtcggta
gaagaacagcaactgatcctcgaagacctcaaagccatcgaccacctgctgggcaagctc
tcgagcaaggcccgggcggcgtttctctataaccgtctcgacggcctcggccacgcagaa
atcgccgagcgtctgggtgtatcagtgccgcgtgttcgccaatacctggcccagggcatt
cgccagtgctacatcgcgttgtacggtgagccggtatga
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