KEGG   Pseudomonas cucumis: PSH97_26140
Entry
PSH97_26140       CDS       T09632                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pcuc  Pseudomonas cucumis
Pathway
pcuc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcuc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PSH97_26140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcuc03019]
    PSH97_26140
Enzymes [BR:pcuc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PSH97_26140
Messenger RNA biogenesis [BR:pcuc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PSH97_26140
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 P-loop_SecA
Other DBs
NCBI-ProteinID: WLG84514
UniProt: A0ABY9EVB0
LinkDB
Position
5754198..5756060
AA seq 620 aa
MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKVYARDLKFVSACIFGGVGMN
PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR
LPSKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPANHKRSLL
AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGEV
RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKSIERMTKQKIADGDLMGFDSSAVEAEKPEVRERPDVRNPRNPRGPRGDGPNGSGGGGG
RKDKGKDKGGKEKPAAGRGERPAREHKPREGTPAREQQRPAPRAAADRAPDEFLDDDIDN
FGNRVDYVPQAKPAQGRGRRPGAPAQGAGASAPRTGQPQGRQNGPRNSSGATTGTPPAKR
SGPRNGAPRDGQARREESRNRRPARDEQPRSEPAVQNPRGPAPKIIHKESKSDRFPTPEQ
LDQLPGRPRGEKPALLTRNR
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgtcctttgcttccctcggtctctccgaggctttagtccgcgccatcgaggcagcgggc
tataccgagcctactccggtgcaacagcgggccattcccgccgtgttgcaaggtcgcgac
ctgatggttgcggcacagacaggtactggtaaaaccggcggcttcgcccttccgattctg
gagcggttgtttcccaacggtcacccggacaaatcccagcgtcacggcccgcgccaaccg
cgcgtactggtcctgaccccaacccgcgaactcgcggcccaggtacacgaaagcttcaag
gtctatgcccgtgacctgaagttcgtcagcgcctgcatcttcggcggcgtcggcatgaac
ccacaggttcaggccatgtcccgcggtgtcgacgtgctggtggcctgtcccggtcgcctg
ctcgacctcgccggccaaggcagtgtcgacctgtcccacgtggaaatcctcgtgctggac
gaagccgaccggatgctcgacatgggctttgtccatgacgtgaaaaaggtcctcgcccgt
ctgccgagcaaacgccagaacctgctgttctcggcgaccttctccaaagacatcaccgac
ctcgccggcaagttgctgcacaacccggaacgcatcgaagtcacgccaccgaacaccacg
gtcgagcgcatcgaacagcgcgtattccgtctgccggccaaccacaagcgttcactgctg
gcgcacctgatcaccgcaggcgcctgggaacaggtgctggtgttcacccgcaccaagcac
ggcgccaaccgcctggccgagtacctggacaagcacggcctcaccgccgtcgcaatccac
ggcaataagagccagaacgcccgcaccaaagccctggccgacttcaaggccggtgaagtg
cgcatcctggtcgccaccgacatcgccgctcgcggcctggacatcgaccagttgcctcac
gtggtcaacttcgaactgccgaacgtcgacgaagattacgtgcaccgtatcggtcgtact
ggtcgtgccggtcgttcgggcgaggcgatctcgctggtcgctccggacgaagaaaagctg
ctgaaaagcatcgagcgcatgaccaagcagaaaatcgccgacggcgacctgatgggcttc
gattccagcgctgtggaagccgagaaacctgaagttcgcgagcgtccggatgtgcgtaac
ccgcgcaacccacgtggcccgcgcggcgacggcccgaacggcagcggtggtggtggcggt
cgcaaagacaaaggcaaggacaaaggcggcaaggaaaaacctgccgctggccgtggcgag
cgcccggcgcgtgaacacaagccacgcgaaggcaccccggcccgcgaacaacagcgcccg
gcccctcgcgccgccgccgaccgtgctccggacgagttcctggacgacgatatcgataac
ttcggtaaccgcgtcgactacgtgcctcaagccaaaccggctcagggccgtggccgccgt
ccgggcgctccggcacaaggcgcaggcgcaagtgctccgcgcaccggtcagccacaaggt
cgccagaacggtccgcgcaacagcagcggcgcaaccaccggcacgccaccggccaagcgc
agcggcccacgcaacggtgctccacgtgacggccaggcccgtcgcgaagagtcccgcaat
cgccgcccggcccgtgacgaacaacctcgttcggaaccggccgtgcagaacccgcggggc
ccggcaccgaagatcattcacaaggagtcgaaaagcgatcgcttcccgacacctgagcaa
ctggatcaactgccaggccgtccacgcggcgaaaaaccagcgttgctgacccgcaatcgc
tga

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