Pseudomonas cucumis: PSH97_27190
Help
Entry
PSH97_27190 CDS
T09632
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc00300
Lysine biosynthesis
pcuc00470
D-Amino acid metabolism
pcuc01100
Metabolic pathways
pcuc01110
Biosynthesis of secondary metabolites
pcuc01120
Microbial metabolism in diverse environments
pcuc01230
Biosynthesis of amino acids
Module
pcuc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSH97_27190 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSH97_27190 (dapF)
Enzymes [BR:
pcuc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSH97_27190 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WLG84715
UniProt:
A0ABY9EWQ5
LinkDB
All DBs
Position
5969139..5969969
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDIRNDGQISVNM
GAPRLVPAEIPFEAPSQALSYQVDVDGTTVELAAVSMGNPHAVLRVSDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaacgacttcatggttctcgacctg
gtcagccagcacgcgcacatcctgcccaagcatgccaagcaatggggcgatcggcacacc
ggcatcgggttcgaccagttgctgatcgtcgaggcgccgagtaacccggacgtggacttc
cgctaccggatcttcaactccgacggctccgaagtggaacagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctcgacaagcgcctgaccgccaagcggcagattcgcgtcgag
accaaaagcggcatcatcgaactggacatccgcaacgatggtcagatcagcgtcaacatg
ggcgccccgcgcctggtgccggccgagattccattcgaagccccgagccaggccctgagc
tatcaggtcgacgtcgacggcaccacggtcgaactggccgcagtgtccatgggcaacccc
catgccgtgttgcgggtcagcgacatcaacaacgcaccggtacatgaactggggccgaaa
atcgaacatcacccgcgcttcccggcgcgagtcaatgtcggttttctccaggtcatcgac
cggaaccgcgcgcagttgcgcgtctgggaacgtggcgccggggaaacccaggcctgcggt
accggcgcttgcgcagctgcagtggctgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgcctggcgggcgtctgtccattgaatgggcaggccctggccaaccggtc
atgatgaccggcccggcagtgcgcgtatacgaaggacaagtgcgtctttga
DBGET
integrated database retrieval system