Pseudomonas cucumis: PSH97_27595
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Entry
PSH97_27595 CDS
T09632
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02025
Biofilm formation - Pseudomonas aeruginosa
pcuc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSH97_27595 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH97_27595 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcuc02044
]
PSH97_27595 (tssM)
Secretion system [BR:
pcuc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH97_27595 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_29
SRC-1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WLG84792
UniProt:
A0ABY9EYF6
LinkDB
All DBs
Position
complement(6053654..6057178)
Genome browser
AA seq
1174 aa
AA seq
DB search
MKKFFKKVGAFLRQTWVWTLLLVLFVALLVWFVGPLLAVNDYKFWESSTSRLLTISVLFL
IWGLTMVFVSWRAGVRKKAVEETEDGQDRIRREELIDEEEKELKVRFKDALKTLKTSSLY
RGRSERWRSDLPWYLLIGPQGSGKTSLLDFSGLEFPINKIDRKLTRDTLGTRHCDWYFAD
HGVLIDTAGRYLTQPDAEVDGSAWSTLLDLLRKRRRNRPLNGVLVTIPVETLLGGSEQDL
DTLARQVRARLQDVHQKLHVDVPIYLVLSKADRLLGFDEFFDQLTREESDQVLGTSFRKE
QSGTDVAVLRAEFEELLRRLNSQVIMRMHQERDTQRRGRILDFPHQLGQIGERLCLFVDM
AFTGNRYQRVSQLRGFYLTSAPHLTQEMDQTTAGIGANLGMNAGVLPTLRSGRSRFIHHL
LSRVIFPEADLAGLDKRERSRIHWGQRALYVGALAALALFGMLWAGGFSANYERLENLRS
LAQTWKQQRSALTVRDDAMAVLKTLDTSYAATQVFPNKGDVSYHERGGLYQGEDVNPVAK
SAYERELEAQLLPRVATLLEGQIRANMKDRERLLNSLRAYLMLNMKDRRDAAWLKDWVAT
DWSLRYAGNTAVQNGLNTHFERLLKQPFIYPLNDQLVTQARQVLRSESLANVVYRMLREQ
ARVLPEYRFSQHLGPQGALFVGTDYVIPGFYTQQGYQQYFSVQGTALVTDILRDNWVLGE
GSGISGMDLRRLMVELEQLYFRDYANFWSEAVGQVALPPINDAGEGAEQLAGLTSANSPV
LQLLVEVRENTRFQVIADSADEAADAADKLGEKGGKLGKLAAAAADKASDMAKNLPDTAK
KSLQRRFEPLHRLLDDNNGPAADLTPALTALNDLQLQLSSLARASAPEQAAFEMAKTRMS
GQRDALSNLRNASNRLPRPVSVWFNVLAEDTWRLVLNDSYQYLNQRYQSELYSFYGKAIN
KRYPFSAHSTSDVAISDFREFFKAQGIADRFFENYMRPFVSGDPGNYRLRSIDGHSMPIS
KVYLDQMAAAQVIRQSFFSINPAEPQVQFKLEPYTLDPAVSRSEFKFGDKTIEYRHGPIV
PVSFKWPTDAEDGRTSLVLDKMAGRPIGIEKNSGPWSLFRLFDLMQTEYLMGRDVLVLKA
DVGGLRANYLLSSQRTPNPFDMGVLRTFRMPVQL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttttcaagaaagtcggcgcattcctgcgccagacctgggtctggaccctg
ctgctggtgctgttcgtcgcgctgctggtgtggttcgtcgggccgctgctggcggtcaat
gactacaagttctgggaaagttcgacctcccgcctgctgaccatcagtgtgctgttcctg
atctggggcctgaccatggtcttcgtcagctggcgcgccggtgtgcgcaaaaaggctgtg
gaagaaaccgaagacggccaggaccgtatccgccgtgaagagctgatcgacgaagaagag
aaagagttgaaggtgcgtttcaaggacgccctgaaaaccctgaagacctcgagcctgtat
cgcggtcgcagcgagcgctggcgcagtgatttgccgtggtacttgctgatcggcccacag
ggcagcggcaagaccagcctgctggacttctcgggccttgagtttccgatcaacaagatc
gaccgcaaactcacccgcgacaccctcggtactcggcattgcgactggtacttcgccgat
cacggcgtgctgatcgacaccgccgggcgttacctgacccagccggatgccgaagtcgat
ggcagcgcctggagcaccttgcttgacctgctgcgcaagcgtcgtcgcaaccgtccattg
aacggcgtgctggtgaccatcccggtggaaacactgctgggcggcagcgagcaagacctc
gacaccctggcccgccaggtgcgtgcgcgtctgcaagacgtgcatcagaaactgcacgtc
gacgtgccgatttatctggtgctgagcaaagccgatcgcctgctcggtttcgacgagttc
ttcgatcagctgacccgcgaagaaagtgatcaggtgctcggcaccagcttccgcaaagag
cagagcggtactgacgtggccgtgctgcgcgccgagttcgaagagctgctgcgtcgcctg
aacagccaggtgatcatgcgcatgcaccaggagcgcgacacccagcgccgtggtcgcatc
ctcgacttcccgcatcaactggggcagatcggcgagcgcctgtgcctgttcgtcgacatg
gcattcaccggcaaccgctaccagcgtgtcagccagttgcgcggtttctacctgaccagc
gcaccgcacctgactcaagagatggaccagaccactgccggcatcggcgcgaacctgggc
atgaacgccggcgtgctgccgaccctgcgcagtggccgttcgcggttcattcaccatttg
ctcagccgggtgattttccccgaggccgatctggccggtctggacaagcgcgaacgcagc
cgcattcattggggccaacgtgccctgtacgtgggcgcactggcggcgctggcgctgttc
ggcatgctctgggcgggcggtttctcggccaactatgagcgtctggaaaacctgcgttcc
ctggcacaaacctggaagcaacaacgctcggcactgactgtgcgtgatgacgccatggca
gtgctcaagaccctcgacaccagctacgcggcaacgcaggtcttcccgaacaaaggtgac
gtgtcgtaccacgagcgcggcggcttgtaccaaggcgaagacgtcaacccagtggccaag
agcgcctacgagcgtgagcttgaagcgcaactgctgccacgggttgcgacgctgctggaa
gggcagatccgcgccaacatgaaggatcgcgaacgcctgctcaacagcctgcgcgcgtac
ctgatgctgaacatgaaagatcgtcgcgatgcggcatggctcaaggattgggttgccact
gactggtccctgcgctacgccggcaacacggcggtgcagaacggcttgaacacgcacttc
gagcgtttgctcaagcagccgtttatctacccgctgaacgatcaactggtgacgcaggcc
cgtcaggtgctgcgcagcgagtcgctggccaacgtggtttaccggatgctgcgcgagcag
gctcgcgttctgccggaataccgtttcagccaacacttgggcccacagggtgcgctgttt
gtcggcaccgattacgtgattccggggttctacacccaacagggttatcagcagtacttc
tcggtccagggcactgcgctggttaccgatatcctgcgtgacaactgggtgctgggcgaa
ggctcgggcatcagcggcatggacttgcgtcgtctgatggttgaactggagcagctgtac
ttccgcgactacgccaacttctggagcgaagcggtcggccaggttgccttgccaccgatc
aacgacgccggtgaaggcgccgagcaactggcgggcctgacttccgccaactccccagtg
ctgcaattgctggtggaagtgcgtgagaacacccgttttcaggtcatcgcagacagcgct
gatgaagccgccgatgcggctgacaagctgggcgagaagggcggcaagttgggcaaactc
gctgcggctgccgctgacaaagcgtcggacatggcgaagaacttgccggacaccgcgaag
aaatccctgcaacgtcgcttcgaaccgctgcaccgtttgctggatgacaacaacggcccg
gccgcagacctgaccccggccctgacggcgctcaacgacctgcaactgcaactgtcgagc
ctggctcgggccagtgcgccggagcaggctgcgttcgaaatggccaagacccgcatgagc
ggccagcgtgatgcgctgagcaacttgcgcaacgcgtcgaaccgtctgccgcgcccggta
agcgtatggttcaacgtgctggccgaagacacctggcgtctggtgctcaacgattcctat
cagtacctgaaccagcgttatcagagcgagctctacagcttctacggcaaggcgatcaac
aagcgttacccgttcagcgcccacagtaccagcgacgtcgcgatcagcgacttccgcgag
ttcttcaaggcccagggcatcgccgaccgcttcttcgagaactacatgcgtccgttcgtg
agtggcgatccaggcaactaccgcctgcgcagcattgacggtcacagcatgccgatctcc
aaggtctacctcgaccagatggccgcggcacaagtgatccgccagagcttcttctcgatc
aacccggccgagccgcaagtgcagttcaaactggagccgtacaccctcgatccggccgtc
agccgttccgagttcaagttcggcgacaaaaccattgaataccgtcacggcccgatcgtg
ccggtgtcgttcaaatggccgaccgacgctgaagacggtcgcaccagcctggtcctcgac
aaaatggccggccgcccgatcggcatcgagaagaactccggcccatggtcgctgttccgt
ctgttcgacctgatgcagaccgagtacctgatgggtcgcgacgtgctggtactcaaggct
gacgtgggtggcctgcgcgccaactacttgctgtcgagccagcgcacgccgaacccgttc
gacatgggcgtgctgcgtactttccgtatgccggtgcaactctga
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