Pseudomonas cucumis: PSH97_27605
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Entry
PSH97_27605 CDS
T09632
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH97_27605 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcuc02044
]
PSH97_27605 (tssK)
Secretion system [BR:
pcuc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH97_27605 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WLG84794
LinkDB
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Position
complement(6058073..6059404)
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AA seq
443 aa
AA seq
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MNAHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGSYTWGFLNLEIDLQFLNMGKLV
ISQASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIESRRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICEVLDTTPDGVIS
LDPDFVPTYIQAHSSSYLLSCLKEVISMLGHRGDTIADRIRSNGKVGGAEVGDFMMLQLI
NRTEMLLRHYLGLEQVHPEELYRTLLTMLGDLATFSSESKRPRLDSRYQHSDQGASFRKL
MEAIRQVLSMVLEQHAIELVLQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRHR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccataaagtcatttggcaggaaggcatgctgctgcgtccgcagcacttccag
cacaacgatcgttactacgaccaccagatgaagacccgcacccagttgctgggcagttat
acctggggcttcctgaacctggaaatcgacttgcagttcctcaacatgggcaaactggtg
atcagccaggcctcggggattctgccggacggcagcctgttcgaactcggcggcaacacc
gagccgttggcgctggacgtgccgccgaatactggcaacacgccgatctacctggcgctg
ccgctggtcaccggtaaccacatcgagtctcgccgcccggagcagtccgacgtgctggcg
cgctacaccgcgtacgacgcggaagtggccgactccaatgccggcgacgactccgccagc
caggtcagctgcggtcgtccggacttcaaactgttgctcggcgagcagcagagcgaccag
gcctacgtgaagctgaagatttgcgaagtgctcgacaccacgcccgacggcgtgatcagc
ctcgacccggacttcgtgccgacctacattcaggcgcattcgtccagctacctgctgtcg
tgcctcaaagaagtgatcagcatgctcggccaccggggcgacaccatagccgaccggatc
cgctccaacggcaaggtcggtggcgcggaagtcggcgacttcatgatgctgcaactgatc
aaccgcaccgaaatgctgctgcgccattacctcggcctggaacaggttcacccggaagag
ttgtatcgcacgctgctgaccatgcttggtgatctggcgacgttttccagcgagagcaag
cgcccgcgtctggacagccgttaccagcacagcgaccagggcgcgagcttccgcaaactg
atggaggcgattcgtcaggtgctgtcgatggtgctcgaacagcacgccatcgaactggtg
ctgcaagcgcgccagtacgggatcatcgtgtcgccgttgcacgaccacaaactgctgggc
tcggcctcgttcgtactcgccgccagcgccaactgcgactccgaagaactgcgccatcgc
ttgccggcgcacctcaaggtcggcccggtggagcgcatccgccaactggtcaacctgcat
ctgccgggcatcaaggtcaaaccgttgccggtggccccgcggcagatcgcgttccactcc
aacaaaacctatttcattctcgaactcagttccgaagacctggcgcaactcgagcgctct
ggcggcttcgcgttccacgtgtccggcgaatttgccgagcttgaactgaaattctgggcc
atcaggaactga
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