Pseudomonas cucumis: PSH97_27675
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Entry
PSH97_27675 CDS
T09632
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH97_27675 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcuc02044
]
PSH97_27675 (tssC)
Secretion system [BR:
pcuc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH97_27675 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
WLG84808
LinkDB
All DBs
Position
complement(6071294..6072766)
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AA seq
490 aa
AA seq
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MSTSAAQQKSNESEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVKK
AMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVSKD
DLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSSVA
CMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTVPR
FLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQ
SGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSAS
SVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELE
LNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFT
LSLVGKLDKE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacagcaaaagagcaacgagagcgaatacagcattctcgacagc
atcatcgccgaaacccgcctgaccccggatgacgaagcctacgacatcgccaaacgcggt
gtgtcggcattcatcgaagaactgctcaagccgcagaacaacggtgagccggtcaagaag
gccatggtcgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggacgaa
atcctgcaccaccctgacttccagtccctggaatcgtcgtggcgtggcctgcagttgctg
gtcgatcgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaggac
gacctgctggacgattttgaagattcgccggaagtgatgcagtcgggcctgtacaagcac
atctacaccgctgaatacggtcagttcggtggtcagccagtcggcgcgatcatcgccaac
tacttcatgtccccaagctcgccagacgtgaaactgatgcagtacgtgtccagcgttgcc
tgcatgtcgcacgcgccgttcatcgcggctgccggcccgaaattcttcggcctggaaagc
ttcactggtctgccggacctgaaagatctgaaggatcacttcgaaggcccgcagttcgcc
aaatggcagagcttccgccagtcggaagactcccgttacgttggcctgaccgtgccgcgt
ttcctgctgcgtaacccgtacgacccggaagaaaacccggtcaaatcgttcgtgtacaaa
gaaaccgtcgccaacagccacgagcactacctgtggggcaacaccgcctacgcgttcggc
accaaactgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccgcag
agcggtggcgcggttgaagacctgccgttgcaccacttcgaaagcatgggcgaaatcgaa
accaagattcctaccgaggtattggttagcgaccgtcgtgaatacgaactggccgaggaa
ggtttcatctccctgaccatgcgtaaaggctctgacaacgcggcgttcttctccgcaagc
tcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcggcagagctgaac
tacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactacttg
aaagtgctgcagcgcgagcaactcggttcgtggaaagaacgtaccgacctcgagctggaa
ctcaacaagtggatccgccagtacgtggccgaccaggaaaacccaagcgccgaagttcgt
ggccgtcgtccgctgcgcgctgcccaaatcatcgtcagcgatgttgaaggcgagccgggc
tggtaccgcgtcagcctgaacgtgcgcccgcacttcaagtacatgggtgccgatttcacc
ctgtcgctggttggcaagctggacaaagagtaa
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