Pseudomonas cucumis: PSH97_27735
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Entry
PSH97_27735 CDS
T09632
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH97_27735 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcuc02044
]
PSH97_27735 (tssK)
Secretion system [BR:
pcuc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH97_27735 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
WLG84819
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Position
complement(6089656..6090990)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIISARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDDGETLG
AARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGISDYAAIGLVRIKEKRADRAL
VLDDTYIPPLLDVVASKPLAAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFYSELVSLAGEFSTFTASGRRPQEYPQYQHDDLALSFAP
VMQALREALSMLIDSKATPIPIVEKAYGVHVAMLADKSLLDSASFILVVRADVPAETLRS
HFGQQSKVGSVEHIRNLVNLQLPGIGLLPLPVAPRQIPYHAGSTYYELDRGSEHWQQLAN
SGGFAFYIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgtgtggtctggtcggaaggcatgttcattggaacgcagcacttc
cagcagcatgaccgatacctggaaaacctcatcgacgcccggagccgcccgttgtcggcc
ggcgcctggggtttctccgaattgctgatcgaccagggtctgctggcccagggcaaactg
gcgatcatctcggcgcggggcctgttgccggacggcacgccattcaacattccccaggac
gacctggcaccgagcccgctgaacatcgacgacaacctgcgcgatggtctggtgtacctg
gctttgccgctcaagcgcgccggtgcacgtgacaccgttgatgacggcgaaaccctgggc
gctgcgcgctacgtgagccaggtgcgcgaagtgcgggacgacaacgcgccattcgaaaac
cgtgcgccagtggctgtgggttcgagagcgctgcgattattgacggctcaggatggcatc
agcgactacgccgccatcggcctggtacgaatcaaggagaagcgcgccgaccgcgccctg
gtgctcgacgacacttacatcccgccactgctggatgtggtcgcttccaaacccctggcc
gcgtttcgcagcgagctgctgggcctgctgcatcagcgcggcgaagccctcgccgggcgg
gtggtggcgtccggtgccggcggtgcctcggagattgccgatttcatgctgctgcaactg
gtcaaccgtgcccaaccgctgatccagcacttgagccagttgagcccgttgcaccccgag
cggttctacagcgagctggtgagtctggccggcgagttctcgacctttaccgcttccggg
cggcgaccccaggaatacccgcagtaccagcacgatgacttggcgctgagtttcgccccg
gtgatgcaagccctgcgtgaggcgctgtcgatgctgatcgacagcaaggccacgccgatt
ccgattgtcgaaaaagcctacggcgtccatgtggcgatgctggccgacaagtccctgctc
gacagcgccagcttcatcctggtggtgcgcgccgacgtacccgccgaaaccctgcgcagc
cacttcggccaacagagcaaggtcggctcggtggagcacatccgcaacctggtcaacctg
caattaccgggcattggcctgctgccgctgccggtggcgccacggcagatcccgtatcac
gccggctccacttattacgagctggaccggggcagcgagcattggcagcaactggccaac
tccggcggttttgcgttctacatcgcggggcaattcccggggctgaacctggctttctgg
gcgatccgaggataa
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