Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138717153
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Entry
138717153 CDS
T11607
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcur03041
]
138717153 (DDX1)
03016 Transfer RNA biogenesis [BR:
pcur03016
]
138717153 (DDX1)
Enzymes [BR:
pcur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138717153 (DDX1)
Spliceosome [BR:
pcur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138717153 (DDX1)
Transfer RNA biogenesis [BR:
pcur03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
138717153 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
138717153
NCBI-ProteinID:
XP_069706579
LinkDB
All DBs
Position
2:complement(113364440..113383785)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDLDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGNVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRTLGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgttatgcctgaaatagctcaagcagtggaggagatg
gactggcttcttcctacagatatccaagcagaatccatcccactgatcctgggaggtggt
gatgtacttatggctgctgaaactgggagtggaaaaactggtgcttttagcattccagtt
atccagattgtttatgaaacactgaaggaccagatggaaggcaagaaagggaaagcaact
attaaaaccggtggagcagtgctcaataaatggcaaatgaacccctatgacagaggatca
gcttttgcaattggatcagatggtttgtgttgtcaaagcagagaggtaaaagaatggcat
ggatgcagagcaactagaggcgtaactaaaggaaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggctggtcgactatgcaggcttcactagatttgggcact
gataaatttggctttggctttggtggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacaattgggtgttatctagacctagataaa
ggacaaataaaattttccaaaaatggaaaggaccttggccttgcatttgaaatcccacca
cacataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagaagatttcaagtttccaccaaaagatggctatataggcctttgcaag
gctcccgatggtaatgttgtaaaatcacagcactcaggaaatgcacaagtggttcaaaca
cagaacctcccaaatgctccaaaagcattgattgtggaaccgtcaagggagctggcagaa
caaaccttgaacaatgtgaagcagttcaaaaaatatgttgataatcccaaattaagggaa
ctgttgattattggtggggttgccgcaagagatcaactctccatactggaacaaggagtg
gatattgttgttggaactcctggaagactggatgacctagtctcaacggggaagcttaat
ttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacagaatccacagccaaattcctcagataacttcagatggaaagaga
cttcaggtgattgtctgctctgcaacgcttcactcttttgatgtgaaaaaactatctgaa
aagatcatgcattttcccacttgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgtaaatcccaaagctgacaaactctgggaaagactcggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacacgacctggcgctaac
actccagaaatgtggtctgaagctattaaaattctaaaaggagagtacactgttcgagca
atcaaagaacacaagatggaccaagccattattttctgcaggactaaattagattgtgat
aatatggagcaatacttcatccaacagggcggaggccctgataggaagggacatcagttc
tcatgtgtttgtcttcatggtgacagaaaacctcaagaaagaaagcagaacctggaaagg
tttaagagaggagatgtccgtttcttgatctgcacggatgttgctgctagaggaattgat
attcatggtgttccatatgttatcaatgtcacactccctgatgaaaagcagaactatgtt
catcgaattgggagagtaggcagagctgagaggatgggtttggcaatctcccttgtagca
aaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgttataat
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagagcacttaaactgcaccattgcccaagttgaaccagacataaaagtacca
gtagatgattttgatgggaaagttacatatggccagaaaagaactttgggtggtggactc
tataaaggccatgtggatattctggcacctacagtacaagagttggctgctcttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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