Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138717337
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Entry
138717337 CDS
T11607
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03018
RNA degradation
pcur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138717337 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
138717337 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcur03019
]
138717337 (LSM8)
03041 Spliceosome [BR:
pcur03041
]
138717337 (LSM8)
Messenger RNA biogenesis [BR:
pcur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138717337 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
138717337 (LSM8)
Spliceosome [BR:
pcur03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138717337 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
138717337
NCBI-ProteinID:
XP_069706954
LinkDB
All DBs
Position
1:complement(25393159..25399227)
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggccttggagaactacatcaaccgtactgttgcagtaattacttctgatgga
agaatgattgtgggaaccctcaaaggttttgatcagactattaacttaattttggatgaa
agccacgaacgagtgttcagttcttcacaaggagttgagcaagtagtgctgggattatac
atcgtaagaggtgataatgttgctgtcattggtgaaattgatgaagagacagattcagct
cttgacttggggaatattcgagcagaacctttaaactcagttgtgcattga
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