Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138719128
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Entry
138719128 CDS
T11607
Name
(RefSeq) transcription factor SOX-17-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
138719128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcur03000
]
138719128
Transcription factors [BR:
pcur03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138719128
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
138719128
NCBI-ProteinID:
XP_069710212
LinkDB
All DBs
Position
3:58184507..58187787
Genome browser
AA seq
378 aa
AA seq
DB search
MSSPDAGYASSDDQAQGRCSLPVMMPAVGPCPWAEALSPRGEGKGKGEAAPSGGRSKSEA
RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLSEKRPFVEEAERLRV
QHMQDHPNYKYRPRRRKQVKRPKRAESGFPQHGLAAAAAGVGGEAGGVGMCAEGLGPPYG
ERGYAPGRYREQRPPPGAAFDGYGLPTPDPSPLDAAESEAPFLAAGLREECALAPYGYAP
HPASEYPAAAAGGEGPGGALQALLGCPAPPHAYYGQACQPPGPGRGPPPPGALGQPSPPP
EAAPCREPLEHLPQEELLGEVDRAEFEQYLRFACKPELGLPFAGHDAAGLPAPEPAGPLS
SAVSDAGGAVYYCGYPGV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccaggcgcaggggcggtgctcg
ctgcccgtcatgatgccggccgtgggcccgtgcccgtgggcagaggcgctgagcccgcgg
ggcgagggcaaggggaagggcgaggcggcgccgtcgggcgggcggagcaagagcgaggcg
cggatccgccggcccatgaacgccttcatggtgtgggccaaggacgagcgcaagcggctg
gcgcagcagaacccggacctgcacaacgccgagctcagcaagatgctgggtaaatcgtgg
aaggcgctgtcgctgtcggagaagcgtccgttcgtggaggaggcggagcggctgcgggtg
cagcacatgcaggatcaccccaactacaagtaccgcccgcggcgtcggaagcaggtgaag
cggccgaagcgggcggagagcggcttcccgcagcacgggctggcggcggcggcggccggt
gtgggcggcgaggccggcggcgtcgggatgtgcgcggaggggctggggccgccctacggc
gagcggggctacgcgccgggccggtaccgggagcagcggccgccgccgggcgccgccttc
gacgggtacgggctgccgacgccggacccgtcgccgctggacgcggcggagagcgaggcg
ccgttcctggcggcggggctgcgggaggagtgcgcgctggcgccctacggctacgcgccg
cacccggcatccgagtacccggcggcggcggcggggggcgagggcccgggcggggcgctg
caggcgctgctgggctgcccggcgccgccgcacgcctactacgggcaggcgtgccagccg
ccgggcccgggccgcgggccgccgcctcccggggcgctcgggcagccgtcgcccccgccc
gaggcggcgccgtgccgggagccgctggagcacctgccgcaggaggagctgctgggcgag
gtggaccgcgccgagttcgagcagtacctgcgcttcgcctgcaagcccgagctggggctg
cccttcgcgggccacgacgccgccgggctgccggcgcccgagcccgcggggccgctctcc
tcggccgtgtcggacgccggcggcgccgtctactactgcggctaccccggcgtctga
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