Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138719941
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Entry
138719941 CDS
T11607
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcur00536
]
138719941 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pcur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138719941 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
138719941
NCBI-ProteinID:
XP_069711651
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Position
4:23104460..23417921
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AA seq
715 aa
AA seq
DB search
MGGGGKEIKAAAAPGCKSMLGKSRGAAGRDGCGSALAALLSALAAASCVYLGLRTSDLQA
RVAAIEGSRGASSAAAPLPGYSLEQLDAMMQEKVERLLAQKTYEHLAKMRVAREAPPECN
CPPGPPGKRGKRGRRGETGPPGLPGRNGYPGPIGMDGKLGQPGPQGPPGPKGEKGDQGDQ
GPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMP
GIPGEPGKPGEQGLTGPQGPPGQKGSIGVPGVPGRDGQVGEPGLPGVAGEKGEAGLKGDP
GERGEKGDAGENGLKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKG
EPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPGAPGPKGKTGEPGSRGPKGSKGD
TGDRGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEALQRIATLTVAGPPGPPGPQGLQG
PKGEPGSPGTPGVDGEQGPKGSKGDTGDAGMPGEKGGIGLPGLPGANGMKGEKGDVGLPG
AQGPSMIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGLKGLKGEPGQKGDRGPLGLPGA
SGLDGKPGPRGVDGPVGPHGPAGPKGDRGEKGTVGDPGPRGPYGLPGKDGEPGLDGFPGP
RGEKGDIGEKGEKGEKGKKGKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggaggaaaggaaatcaaagctgccgcagctccagggtgtaaaagcatgctg
gggaagagccgaggagccgcaggacgggatggctgcggctcggcgctggccgccctcctc
tcggcgctggcggccgcctcctgcgtgtacctggggctgcggacgagcgacctccaagcc
agagtcgcggccatcgagggctcccgaggggcttcctcggccgccgccccgctgcccggc
tattccctggagcagctcgacgcgatgatgcaggagaaagtggagcggctcctcgcccag
aaaacctacgagcacttggcgaaaatgcgagtagcgagagaagcgcctccagagtgcaac
tgcccaccaggtcctccagggaaaagaggtaagcggggcagaagaggagagactggacct
cctggtctaccagggcgaaatggctacccgggtccgattggtatggatggaaagctgggt
cagcctggtcctcaaggccctcctggtccaaaaggcgagaagggagatcaaggtgatcag
ggccctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctc
attaaacgccgcctcattaagggggaccaaggacaagctgggcccccggggcctccaggg
ccaccaggacccagaggtcccccaggagatactggcaaagatggtcctcgtgggatgcct
ggcataccgggtgagccaggaaaaccaggagaacaaggattgactggacctcaggggcct
ccaggacaaaagggttctatcggagtgcctggtgttccagggagagatggacaagtgggt
gaacctggtttgcctggagtagcaggagagaaaggagaggcagggcttaagggtgaccct
ggagaaagaggagaaaagggtgatgctggagaaaatggactgaagggtgacacaggagaa
aagggtgaccctggttcttctgctgcaggaattaagggtgaacctggtgaatctggacgg
cctggacaaaagggtgaaccaggtcttcctgggcttcctggactccctggaataaagggt
gaaccaggtttcattggtccacaaggagaacctgggttgccagggctaccgggaacaaag
ggtgacagaggagaggcaggccctgttgggaagggtgagcgaggtgaacctggagctcct
ggaccaaaggggaaaacaggtgaacctggatctagaggccccaaagggtcaaagggtgat
acaggtgacagaggtgacacaggatctgcaggtccacggggaccacctggacagaaaggt
gatcaaggcgcaacagagataattgattataatggcaatatccatgaagctctgcagagg
attgccaccctgactgttgcgggaccaccaggaccaccaggaccccaagggctccaggga
ccaaagggtgaaccaggatccccaggaactccaggagttgatggggagcagggtcctaaa
ggctcaaaaggagatacaggtgatgctggaatgcctggagaaaaaggaggaattggattg
cctggcctgccaggagccaatggtatgaaaggcgaaaaaggagatgttggtttgcctggt
gcccaaggtccttcaatgataggaccacctggaccaccagggccacatggtcctccaggc
cctatgggacctcatggactgcctggtccaaagggtgaaccagggttaaatggtcttaaa
ggattgaagggtgaaccaggtcaaaagggtgacagagggccccttggtcttccaggagca
tctggcttagacggaaagccaggaccccggggtgtagatggcccagttggtccccatggc
cctgcaggtcccaaaggagacagaggcgaaaagggaactgtaggtgatcctggacccaga
ggaccttacggcttgcctggaaaagatggcgagcctggccttgatggtttccctggtcct
cgaggagaaaagggtgatataggagagaagggagaaaagggggaaaagggaaagaaaggc
aaaaaggggcctaaaggggagaaaggagaacagggtgctcctggattagatgcaccttgc
ccattgggtcctgatggattaccaatgcctggctgttggcaaaagtga
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