Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138720511
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Entry
138720511 CDS
T11607
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur04137
Mitophagy - animal
pcur04140
Autophagy - animal
pcur04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138720511 (HIF1A)
04137 Mitophagy - animal
138720511 (HIF1A)
04148 Efferocytosis
138720511 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcur03000
]
138720511 (HIF1A)
Transcription factors [BR:
pcur03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138720511 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DUF4350
Motif
Other DBs
NCBI-GeneID:
138720511
NCBI-ProteinID:
XP_069712898
LinkDB
All DBs
Position
5:63266457..63298607
Genome browser
AA seq
815 aa
AA seq
DB search
MQSPCCCISAVVRPDRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDK
ASIMRLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIFMSENV
NKCMGLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLT
SRGRTVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVP
LDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFT
KGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQ
TECMLKPVESPDMKMTKIFSKDDLDDSNSLFEKLKQEPDALTVLAPAAGDTIISLDFGSN
ESDEQQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKL
EPNSEPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEK
LFAIDTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSPGSQSAATITI
FQQTQTPSSTADEIKPVAERVDDVKTLIVPSSPVHIISETSSAPASPYGGNRSRTASPVR
AGKGTLDQTEKSCLGTPSLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQA
VGIGSLFQQTGDRGGNASLAWKRVKGCKTSGHNGVEQKTIILLSTDIASKLLGQSMDESG
LPQLTSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtccatgctgctgtatctcggctgttgtcaggccagacaggattagctcggaa
cgcagaaaagagaagtcaagagatgcagcccggtgtcgaaggagcaaggaatcggaagta
ttctatgagcttgctcatcagctgcccctgcctcacactgtgagcgcacacctggacaag
gcatccattatgagactgaccatcagctacctgcgcatgagaaagctgctagatgctggt
gaactggagacagaagccaaaatggagaaggaactgaactgtttctacttgaaggctctt
gatggatttgtcatggttctatctgaagatggtgacatgattttcatgtctgaaaacgtg
aacaagtgtatgggactcactcagtttgagttgacggggcacagtgtatttgatttcact
catccatgtgaccatgaagagctgagagaaatgcttacacacaggaatggtcctgtgaaa
aagggcaaggagcaaaacacggagcgcagcttttttctcagaatgaagtgtacactgact
agcaggggaagaacagtgaacataaagtctgcaacgtggaaggtactccactgcactgga
cacatccgtgtatacgatacgtgcggcaatcaaactcactgtggctacaaaaagcctccc
atgacgtgtttggtattgatctgtgagcctattcctcatccatcaaacattgaggtccct
ttggatagcaaaacgttcctcagtcgtcacagtctcgatatgaaattttcctactgtgat
gaaagaattacagagttgatggggtatgagccagaggaactcctgggtcgctccatctat
gagtactaccatgcgctggattctgatcacctgaccaaaacgcaccacgacatgttcaca
aaagggcaggtgacgacaggacagtacagaatgcttgctaaacaagggggctatgtctgg
gttgaaactcaagcaactgttatatacaacactaagaactctcagccacagtgcattgtg
tgcgtaaactatgttttgagcgggattgttcagaaggacttgattttttcccttggacag
actgagtgtatgctgaaaccagtggagtctcctgatatgaaaatgaccaaaatattcagc
aaagatgacctggatgattctaacagcctatttgaaaaacttaaacaggaaccagatgct
ttaactgtgctggccccggcagctggagacacaattatctctctagatttcggcagtaat
gagtctgatgaacaacaatgtgatgaagttcctttgtataatgatgtaatgctcccctca
tccagtgagaaattgcagaatataaatatggcaatgtccccactacctgcctctgaaact
acaaagccactccgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctg
gagccaaactcggagccactcgaactttcttttaccatgcctcaggtgcaagagcagcca
accagcccttctgatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgac
tactgctttgacgtggataatgatatggctaatgaattcaaactggaattagtggagaaa
ctgtttgcgatagatacagaagcaaaaaatccattctctactcaggaaactgatttagac
ttggagatgttggctccttacatcccaatggatgatgactttcagttacgatcctttgat
cagctatctccgctggaaagcagttctcctggctctcaaagtgcagccaccattaccata
tttcagcagactcagacaccatcaagtactgctgatgaaataaaaccagtggcagaacgc
gtggatgacgtaaagacgctaattgttccttcttctcctgtccacataatcagtgaaacg
agtagtgctccagcatcaccttacggtggaaacaggagtcgaactgcatctccagtcaga
gcaggaaaaggaacattggatcagacagaaaaatcttgtctgggaacacccagtttgcta
acagtcactctgaataaaagatctactgcaatggatgaagaactaaatccaaagatgcta
gctttgcataatgctcagagaaaacgaaaaatggaacatgatggttcactttttcaggca
gttggaattgggtctttattccagcagacaggtgaccgtggaggaaatgcatcacttgct
tggaaacgtgtaaagggatgtaaaacgagtggtcataatggagtggagcaaaagacaatc
atcctactatcgactgacatagcaagtaaacttctagggcagtcgatggacgaaagtgga
ctaccccaactcacgagttacgattgcgaagtaaatgctcccatacaaggcaacagaaac
ctgctacagggggaagaactgctcagagctctggatcaagttaactga
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