KEGG   Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138721528
Entry
138721528         CDS       T11607                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pcur  Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138721528 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcur03400]
    138721528 (TDP1)
DNA repair and recombination proteins [BR:pcur03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     138721528 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 138721528
NCBI-ProteinID: XP_069714822
LinkDB
Position
5:50912990..50959817
AA seq 607 aa
MLQEGAHGRWTVSSSDESTEENSDSEKPSTSSLLDAAHGRASGPQYPCSEARKAAHKRKA
SPLKFSDQKVSTEKPPAEKQRPTQEGLGWCLSSSDEEPEDQEKHAHKEALKEEKYDVSEE
HPLNLCKDDELSENQKAEEYDETPSEAQDTWDFLNGGNPFRFFLTKVRGIEQSYNSGALH
IKDILSPLFGTLVSSAQFNYCIDVGWLVRQYPQEFRKKPLLIVHGEKRESKAELLAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIADDWHQKTQGIWLSPLYPR
LPKGTTGSAGESETHFKSDLISYLMAYNSPALKEWTDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHASLIPAQESWPLVGQFSSIGSLGADESKWLFSEFQQSLVAT
GSSVTGLHKCDVPVHLVYPTVNDVRESLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAE
VSGRSHAMPHIKTYMRPSPDFKKIAWFLVTSANLSKAAWGALERNGTQVMIRSYELGVLF
LPSAFGLDKGYFRVKGKMLSESNDSATYFPVPYDLPPEKYGSKDQPWIWNIPYTNAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcacatggaagatggacggtatctagcagcgatgaaagtactgag
gagaattctgacagtgaaaaaccatctacatcttcactattggatgctgcacacggcaga
gcaagtgggccacaatatccatgctcggaagccaggaaagctgctcacaagagaaaagca
tctcccctgaagttcagtgatcagaaagtttctacagaaaaacctccagcagaaaaacag
agacctacccaagaaggcttaggctggtgtctttctagtagtgatgaagagcctgaagat
caggaaaagcatgctcacaaagaagcactgaaagaagaaaagtatgatgtatctgaagaa
catcctctgaatctctgcaaagatgatgaactctcagagaatcagaaagcagaagagtat
gatgaaacacccagtgaagctcaagatacctgggatttcttgaatggaggaaaccctttc
aggttttttctcactaaagtcagaggaattgaacagagctataattctggagccctgcac
ataaaagatattttgtctcctctttttgggactcttgtatcttctgctcagtttaactac
tgtatagatgtgggatggcttgtaagacagtatccacaggaattcaggaagaagccgttg
ttgatagttcatggtgaaaagagagaatccaaagctgaactgcttgcacaagcacgccct
tatgagaacatcagcttttgtcaggctaaactggatattgcatttggaactcaccatacg
aaaatgatgttgttgttatatgaagaaggtctcagagttgtaatacatacatctaatctt
attgctgatgactggcaccagaaaactcagggaatatggctaagccctttatatccaagg
ctacctaagggaacaactggttctgctggtgaatctgaaactcattttaaatctgaccta
ataagttacttaatggcttacaattctcctgcgctcaaggaatggacagatctgattcaa
gaacatgatttatcagagacaagagtatatctgcttggttctacccctggacgatatcaa
ggtagtgataaagaaaagtggggtcatcttaggctcagaaagcttttgaaagagcatgct
tcattaataccagcacaggaatcctggcctcttgttggacagttctcaagcattggttca
ttgggagctgatgagtccaaatggctgttctcagagttccagcagagcctggtggctaca
ggcagcagtgtgacaggtctgcacaaatgtgatgttccagttcatttggtttatcctact
gtgaacgatgtgagagaaagtctggaaggctatcctgctggtggctcacttccgtatagt
atacagacagcacagaaacagctgtggttgcattcctattttcacaagtggtcagcagaa
gtctcaggtcgaagtcatgctatgcctcacattaagacatacatgagaccctctcctgac
ttcaagaagattgcatggttcttagtgacaagtgctaatctatctaaagcggcttgggga
gctctggagagaaatggcacccaagtgatgatccgttcttatgaacttggagtccttttc
ttgccttcagcatttgggttggacaaaggttactttcgtgtgaaagggaaaatgctttca
gaaagtaatgattcagcaacatattttcctgtaccttatgacctgccaccggaaaagtat
ggaagcaaagatcaaccgtggatttggaatattccttacactaatgccccggatacacat
ggaaatatgtgggttccatcgtga

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