Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138721983
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Entry
138721983 CDS
T11607
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcur04131
]
138721983 (VPS50)
Membrane trafficking [BR:
pcur04131
]
Protein recycling
Others
EARP complex
138721983 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
138721983
NCBI-ProteinID:
XP_069715738
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Position
6:25475894..25570864
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AA seq
986 aa
AA seq
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MQKIKSLMTRQGLRSPQESVHDLSPIESFRIPCKEDLRELCEEPTDPQAQQEVINSIEEV
YFSNDSFDIVKYELERLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RITSLQAGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAAVSSV
SDGSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSSFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTATLFEQYSNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILRPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPILSSSLSASNREQHSARQFESTGLGLSSSRLRTTLNRIQESLIDLDVSADSTGTLTA
AEERKEKVPSPHLSHLVVLTSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDA
LLKEFEEFSRRLNEVSKRVRIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMDRWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLSVIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
catgacctcagtcctatcgaaagctttcggatcccttgtaaggaggatctcagagaactg
tgtgaagaaccaactgatcctcaagctcagcaggaagtaattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgaattagagaggcttcctccagta
cttaatcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tcgaagaaagttgcggacttgattctagaaaaacagcctgcatatgttcaggaacttgag
cgtattacctcattgcaggctggccttcagttagcagctgttatttgcacaaacggaaga
agacacttgaatatagcaaaggagggcttcacacaaactagtttggggcttcttgcaaat
caaaggaaacgacagttgcttattggattgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggactatccaggagctatt
cagctgtgcttagaatgccagaaagctgccagcactttcaaacactacaattgtataagt
gagttgaattcaaaactgcaagacaccttggaacaaatagaggaacaattggacgtagca
ctctccaaaatatgcaagaactttgatattagtcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacgcagacagcaatggaccagttacatatgcacttcactcaagcc
attcacaataccgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgaaaatcatgaccaagatgaggcagcagctgtgtcctcagtt
tcagatggtagcaatgtgattggaactgaagagaacagttttgaccgcagttatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaaca
tatcttctgggaactgacctttcgagcttcaaatatgatgacttcatatttgtacttgat
gttatcagcaggttgatgcaagttggagaagaattttgtggcagcaagtctgaagttttg
caagaatctataagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacttgggaactttgtcctgttaaatcaagc
tttagcattctgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacaacagcaacattatttgagcagtat
tctaatggaggaaacccttttgaaattcaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcggatgaacaagaaaaaagtgcatatcaagagtat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgaacagacagga
gatgcccctgtgaaaagcatttctcgagaaactctgaggagcagaaagagatcagattat
aaccttaataaagtgaatgcacctatcctaacaaacactacactgaatgtaataaggctt
gttgggaaatacatgcaaatgatgaatattctgagaccaattgcatttgatgtgatccac
ttcatgtcccagctcttcgattactatttgtatgcagtctatacgttttttggccgaaat
gacacgcccatactgagttcctcactctctgcttctaacagagaacagcacagtgctagg
cagtttgaatcaacaggactgggccttagtagcagcagattacgtactacactgaacaga
attcaggaaagtctgattgatctggacgtctctgctgattccacaggaactctcacagct
gctgaagagagaaaggagaaggtgccaagcccacatctcagtcatcttgtagttttgaca
tctggcaattcactgtatggtttggcagagagagtggtggccacggaatctttggtattt
ctggctgagcagtttgagtttcttcagcctcatcttgatgcagtgatgccagctgccaag
aagccttttcttcagcagttctattctcagacggtgtcaaccgctagtgaattacgtaaa
ccagtttactggattgttgctgctaaagccattgattatgaacaaatgctgcttctcatg
actaatgtgaaatgggatgtgaaggaaatcatgtctcaacacaatatatatgttgatgct
cttttaaaggaatttgaagaatttagcaggaggttgaatgaggtgtctaagagagtccgt
attcctctgcctgtctccaacatcctttgggagcactgcatacgcttggctaatagaacg
cttgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatgcaa
ctggactttcagcagttcttaatgaaactagaaaaattaacagacattaggcctattcca
gataaagaatttgtagagacctatattaaagcttactacctaacagaaaatgacatggac
cgctggataaaagagcatagggaatattccactaagcagctgacgaatctggtaaatgtt
tgtctgggctcccacatcaacaaaaaggcaagacagaagctgctgtctgttattgacgac
atagataggcctaaaagataa
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