Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138722894
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Entry
138722894 CDS
T11607
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138722894 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcur03041
]
138722894 (PRPF40A)
Spliceosome [BR:
pcur03041
]
Complex A
U1 snRNP components
U1 related factors
138722894 (PRPF40A)
Complex B
138722894 (PRPF40A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
138722894
NCBI-ProteinID:
XP_069717773
LinkDB
All DBs
Position
7:complement(40829396..40849657)
Genome browser
AA seq
1019 aa
AA seq
DB search
MSGADSAAAAATASPQPLPFSLPKPPPLMQLTPGDAVRPASAAAADQSAKSNRLAGRPDW
PAGKPVSLLAPLLPPRGEPEPLLPFGPAARQPLRGRLLGRCGAGSLLSPAMRPAGVDRGS
LMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGM
MMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVCAAQQTATTTSSVTEDHSKQK
STWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQ
TKESRWAKPKELEDLEAMIKAEENSTKPEDSTPATSAPAAAAEAANATTAAAVESAAAVT
TTTAASAATAAPEAESTAAASAGENESAGTAAAEEQGQAASASGAQEQSGETAASAADDS
SKQEASADSASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMII
NDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRY
KKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMAN
VTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRE
RRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVLSSGSTALD
LFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKL
AFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPA
FEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDS
HSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKDR
ERDSEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgccgactcagcggccgcggcggccacggcgtcgccgcagccgctgccgttc
tctctgccgaagccccccccgctgatgcagctgacgccgggggacgcggtgcgccccgcc
tcggccgccgccgccgaccaatccgccaagagcaaccgcctggccggccgccccgactgg
ccggcggggaagcccgtcagcctgctggctcctctgctcccgccccggggcgaacccgaa
ccgctcctgcccttcggccccgccgcccgacagccgctccggggccgcctgctcgggcga
tgcggtgcgggcagcctgctcagccccgccatgcggcccgcaggcgtcgacaggggctcc
ctcatgatgggacacccaggcatgccgcattatcctcctatgggaatgcaccctatgggt
cagagaccaccaaacatgccgcctgttccgcacggaatgatgcctcagatgatgcccccc
atgggaggaccaccaatggggcagatgccgggaatgatgcagtcggtaatgcctggaatg
atgatgtctcacatgtctcaagctgctatgcagcccacagtcccgccaggagtgaacagc
atggatgcacaagtgggtgtaacacctcctggaacccagacaacacatcctgtcgtttgt
gcagcccagcaaactgccaccaccaccagctctgttaccgaggaccactcaaaacagaaa
tccacgtggacagagcacaaatcaccagatggaagaacatattactataacactgagaca
aagcagtccacatgggagaagccagatgatctcaaaacgcctgctgagcaactgttgtct
aaatgtccctggaaagagtataaatccgattcaggaaagccctactattataattcccaa
acaaaggaatcgcgctgggcaaaacccaaggagcttgaggatcttgaagcaatgattaaa
gctgaagaaaacagcacaaagcccgaagactcaactccagcaacatctgctccagctgct
gcagcagaagctgcaaacgcgaccactgcggccgctgtggaatctgccgcagccgtcacc
accaccactgccgcttctgcagcgacagcagcacccgaagcagaatccacagcagctgct
tctgcgggagaaaacgagagtgctggcacggctgcagctgaggaacaaggacaagctgct
tctgcatctggtgcgcaggagcagagtggagaaaccgcagccagcgcagcagacgactct
tccaagcaggaggcttcagcagattctgcttcaaagaaagaggatgacgatgctcaaccg
gttaaaaaaacctatacatggaatacaaaggaagaagcaaagcaagcatttaaggaactg
ttaaaagaaaagcgagtaccctccaatgcttcttgggagcaagctatgaaaatgatcatt
aatgatcctcgatacagcgctttggcaaaattaagtgaaaagaagcaagcctttaacgct
tacaaagttcaaacagaaaaggaagagaaagaagaagcaagatcaaagtacaaagaagct
aaagaatccttccagcgttttcttgaaaaccatgaaaagatgacatccacaacaagatac
aaaaaagccgaacaaatgtttggggagatggaagtctggaatgcgatatcagagcgtgat
cgtctggaaatttatgaagatgtcttgttctttctgtccaagaaagaaaaggaacaagcc
aagcagttgcgcaagaggaattgggaagctttgaagaacattctagacaacatggctaat
gtcacttactgcaccacatggtcggaggcacagcagtatctgatggacaaccctacattt
gcagaagatgaagaactccagaatatggataaggaggatgctctgatctgtttcgaagaa
cacatcagggcattagaaaaagaggaggaagaagaaaaacagaaaagcttgctcagagaa
agaaggcggcagcgtaaaaatagagaatcttttcagctgtttttagatgagctgcacgag
catggacaattacattcgatgtcctcttggatggagctgtacccaaccataagctctgac
atcagattcactaacatgctcggtcaacctgttctttcatcaggatcaacagcacttgat
cttttcaagttctatgttgaagacttgaaggcacgttaccacgatgaaaagaagatcata
aaggatatcttaaaggacaaaggatttgtggttgaagtgaacacttcttttgaagatttt
gttacggtcatcagttcaactaaaagagctaccactttagatgcaggaaacatcaagctg
gctttcaacagtctgctggaaaaggcagaagcccgcgaaagagagagggaaaaagaagaa
gctcgcaaaatgaagcggaaagagtctgccttcaagagtatgttgaagcaagctactcct
ccaattgaactggatgctgtctgggaggatatcagagataggtttgtaaaggaaccagct
tttgaagacatcactctggagtctgagagaaaaagaatatttaaagacttcatgcatgta
cttgagcatgagtgtcagcatcatcattcaaagaacaagaagcactctaagaagtcaaaa
aagcaccacaggaagcgatcacgttctcgttcgggctcagagtccgaggatgatgatagc
cattccaagaagaaaaggcagcgttcggaatccagatcagtttctgagcgttcttccagt
gcagaatctgagagaagttacaaaaagtcaaaaaaacacaagaaaaagagcaagaagaga
agacataagtctgactcaccagaatcggatgctgaacgtgaaaaagacaaaaaagataga
gagcgagatagtgaaaaggatagagctagacaaagatctgagtcgaaacataaatctcct
actaaaaaacgacctggaaaagactctgggaactgggacacctctggcagcgagctgagc
gaaggggagctggaaaaacagaggaggactcttttggaacaactggatgaagatcaatga
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