Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138724567
Help
Entry
138724567 CDS
T11607
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur04382
Cornified envelope formation
pcur04510
Focal adhesion
pcur04512
ECM-receptor interaction
pcur04518
Integrin signaling
pcur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138724567 (COL4A4)
04518 Integrin signaling
138724567 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138724567 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138724567 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
138724567 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcur04147
]
138724567 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
pcur00536
]
138724567 (COL4A4)
Exosome [BR:
pcur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138724567 (COL4A4)
Glycosaminoglycan binding proteins [BR:
pcur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138724567 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
138724567
NCBI-ProteinID:
XP_069720744
LinkDB
All DBs
Position
10:11272381..11336039
Genome browser
AA seq
1678 aa
AA seq
DB search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NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcgtttgaacggattaagtggcttatcacagctgcctggtgg
atactggttgtcttttcagcacaagaaactgatgggggaggatatgcatatattgaccca
tgtgggggacaagattgctcagtttgtcggtgctttccagaaaaagggtcaagaggtcag
cctggtgagctgggacctcaaggtccaattgggtccttaggatctacaggaccacctggt
ctgccaggggaaaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtttagatggcattcccggctta
ccaggcagtgaaggccccagaggcaagcgtgggttagatggctgcaatggctcaagagga
gatccaggatttccaggcgaaaatggttatattggaccgagaggtccttatggaaatccg
gggcaaaaaggagaaaaaggaaattcggtgtatgtaacacattttggaagaggacctcca
ggagacagtggtgatcctggactccccggcatgcctggacctagagggtcaagaggtgca
gcaggcccatctggatatccaggtccaccagggttgcccggtgttccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtggatggacagaagggggagccgggt
gacattggacttcctgggccaccagggtcaccgctgttagttggaccccctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactacctggggtcacaggacacagagggcca
cgtggtcccaaaggcgtacttgggagaggagaaaagggtgaaaaaggcgttcctggatcc
cctggattgcagggtcatcctggttcttatggagttgcaggttaccctggaatgaagggg
gaaatgggatttgctggttttcctggaaatcctggctatccaggcatacagggggatcca
ggagaaaaaggtcccccaggtcctccaggagctgttggaactctgccgcttcctataaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatgtggggtcagtcggacca
attggtcctgcaggctttcaaggaagaccaggagatgacggaacaagtctacctggcttg
ccaggagtaagtgggccaccaggacctcaaggttttcaaggtgatcctggtttccctgga
acaggtgaaccaatcccaggaagtcctggatttcctggaccaccaggcctaccaggacaa
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgagagagggatccct
ggagaacctggagcacaaggtcagatgggccttccaggaagaaaaggtgtaaaaggagaa
aagggaaatcaaggcctctgctcatgtgttgctggtcctcctggtccccgtggtgtgcaa
ggacctccaggtactccaggaaagaaaggacaaatgggataccctggaagacgtggagag
aagggtgatccaggcttatctggtgcagtgggatcaccagggctccctggaacacctggt
tctgctggacaacatggtgaaaaaggagagaagggtgatccaggaaggattagaataaaa
ggaataaaaggtgaaagaggtcctgctggcgttccaggatttccaggccaaagaggcaat
gatggcagagatggggaagtaggattgcctggggaaaaaggagctgagggtgattctgga
gtatcactgccaggtgataaaggattccctggggtcccaggacttcctggtataaaagga
cagataggattgcctggtttggggtttcctggccctccaggagtcagaggtagccctgga
gactttggtgatactggtggcattgggccacctggtccaaagggccagaaaggtgagact
gtctgcattacgttaccataccctggaaatccaggtcctccaggtcttaaaggtgttcaa
ggaccaaagggtttaaagggactccctggtcgtcctggaccaagtggatttgatgggcaa
aaaggccatcaaggcaggccaggaacaggaattcctgggccagaaggctttcgaggccaa
cctggtgaccctggtgatgaaggtgagagaggagataccgttgatggcagaaacggccct
ccaggtccacctggcatagatggtcagaaaggtgttccaggtgataccacatatggtcct
ccaggaatcccaggcaacagaggactgccaggaccacctggggcacaaggagcaagaggt
gatccaggcatttctgggcttcgaggacagcctggtaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggagatataggagcaccaggctgtccaggcttccctggtcca
ccatgtgacacagctttaccagggccaccaggactcagaggtgtcgtgggcatgccagga
cctcaaggcttaccaggctttaaaggccagaggggagacagaggcttagctgggccacct
ggaatcaaaggtctcagaggctctcctggctcacaaggtcccccaggtcctccaggctcc
cgaggacttccaggacttccaggcaataaaggaccacctggtttgccaggacaaacagga
agcaaagggattcaaggaccccaaggattcccaggactcccaggaacacaaggcctgatg
ggaatcactggtgtaaaaggcgaagaaggaaaaatgggtccacctgggcctagtggagaa
tgtggggatatgggaataaaaggtgaaagagggccgccaggagacagtggctacattaat
atccgtctagagaagggacaaaagggggaaccagggtttcctggtgtgaatggatctaga
ggtgaaagaggtgaaaaaggcaatactggtttcagaggcaccccaggactgccagggaag
aatggtgtcccaggaatgccaggtgaccatggtgacactggcctgatggggtttccagga
ccacgaggtttcccaggaccaaagggcttcagaggaattctgggttttcaaggacaacca
ggtgaccagggtgacaccggcttaccaggaatccctggaaatccaggactgactggccag
aaaggatcgaaaggcaggagaggcgacataaccgctctgcttggtgcacatggtcaaaga
gggtctcctggagatccaggattgccaggactctgtggattcccaggagagaagggttcg
cctggtgtccaagggcagcctggaagacctggatccaagggtgaccccggatacccagga
acacctggatttccaggagctacaggtcctcagggattaccaggagaacctggagaaaaa
gggaaacatggaatttctggacctccaggattacaaggattacctggatcccaaggcaga
aaaggtcttcctggactgcctggactgtatggcttgaatggactaaagggtcaaaaaggt
tctgcaggagctccaggtcaaagtgacacaggtcccccaggatacccaggagagcttgga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggcccccctgga
gaaagggggttcccaggattcccaggtagaagaggacctgttggacctactggacctatg
ggaagatctcccgatagtgcatctcctggtcctccaggtgaccagggaccacctggttta
gatggcatcagaggtcagcctgggaatcctggtcctcctggagaaactatctttgtgcgt
ggagatccaggggatatcggtaatcgaggggtaccaggtaatcctgggctgcgggggcaa
caaggagccagaggtcctccaggaaaccaaggaagaagaggcccaaagggtcctatggga
atccatgggccacagggtccacctggtgctataggacaaccaggagaccaaggttttcag
ggaaaacctggtcgcagaggccccacaggtgaccctggtgaaccaggaaaaacagatgat
tcatgccctgcaatcccaggacctcctggggatgcgggacaaagaggagacgacggctct
gtaggattaccagggcctataggccaccctggaccccaaggaagaaaaggtgaagaaggg
tcgtgtggcctcccaggtcagaatggcttacctgggccacctggaccaccaggtgaccaa
gggaacagaggggaacaaggattcgctgggccacaaggtccacctggccagactggtatc
ccgggaccaccaggcccccatattagatctgcaagtggattcttgctcgtccttcacagt
cagtcagacagagaaccactctgtccacagggaatgccaaaattatggactggctacagt
cttctgtatctggaaggacaagagaaagcacataatcaagatctcggtctggcaggatct
tgccttcctgtgtttaataccatgccttttgcctactgtaacatcaaccaagtttgttat
tatgccagtcgaaatgacaagtcctactggttgtcaagtgctgctcctttaccgatggcg
ccgctctctgaagaggaaatccaaccatatatcagcagatgtgctgtgtgcgaggcccca
gcccaagtggttgcagttcacagccaggatcagtcaattcctccctgcccagtgaactgg
aggagtctctggatcggatattctttcttgatgcacactggatctggtgatcagggtggt
ggacagtcccttatgtcacctggaagttgcctagaagacttcagatcagcaccattcatt
gaatgtcagggtcagcggggaacatgtcaattttttgccaacgaatacagtttctggcta
acgactgtgatgcctgaattgcagtttgcatcagcccccctgtcaggaactcttaaagaa
ggacaagagcagaggaaaaaaatcagtaggtgccaggtatgcctgaagcacagctaa
DBGET
integrated database retrieval system
