Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138727938
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Entry
138727938 CDS
T11607
Symbol
MED13L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pcur
Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcur03021
]
138727938 (MED13L)
Transcription machinery [BR:
pcur03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
138727938 (MED13L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
DUF6969
Motif
Other DBs
NCBI-GeneID:
138727938
NCBI-ProteinID:
XP_069726927
LinkDB
All DBs
Position
17:6281712..6449145
Genome browser
AA seq
2213 aa
AA seq
DB search
MTAAGGWVANGASLEDCHSNLFSLAELTGIKWRRYNFEGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVDVIHRELHMVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYDKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLINEEHIHMAQSSPSPFQVLVSPYGLNGTLTGQSYKMSDPATRKLMEEWQ
YFYPTVLKKKEGMKEEEELGYDSDFPVAVEVIVGGVRMVYPSAFVLISQSDIPMSQNTAN
TGGHMNVGQQGLGSMKDPASTCGMPLTPPTSPEQALMGEGGCSQSSISHSAVQEGTVSVH
SPKKSGKITAKLHNRMVHRVWKECILNRSQSRRKQITTANLEEEVPKKIVSWDFVDPVQR
VRCSCFRHKVFKQRFAAGSGRPPTINQPGFSVGTSSSLPPPASSKHKTTERQEKGEKLQK
RPMMPFHHRPSVTEELCMEQDSSGQKLGLAGMEPSLEVSNSRKYEKPLSIPARNPSKQMN
MNPMDSPHSPTSPLPPTLSPQPRGQEAENLDPPSVPVNPALYGSGLELQPLPSLDERTVL
VGQRLPLMAEVSETALYRGVAQNSESLWKSYKVLSSDDPEFRLPNLPCERYDTKMEINSD
STALKRLLGQPNKRFKILRQQKPVQTLNYLDPLSLIQPPGEGLGDMSDPYTFEDGDIKYS
FTGNKKCKLGAEKDPLKKSKSEDGIGTKDIPATGHSTPVPDGKDAMSIFSSAPKSDTRQD
NAASRAGSGSLTQVTDLAPSLHDLDNIFDNSDEDELGAVSPALRSSKTPAVASEERPVGK
DGRTAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMSYKDGISSETVTALGMMESPMVNMV
PSQLAEFKMEVEDGLGSPKPEDIKDFSYVHRVPSFQPFVGSSLFAPLKMLPSQCLLPLKI
PDACIFRPSWAVPPKIEQLPLPPAATFIRDGYNNVPSVGSLADQDYLQMNTPQMNTPVTL
NSTAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPAS
TPSTTRPLNSVEPATVQPIPEAHSLYVTLILSDSVLNIFKDRNFDSCCICACNMNIKGAD
VGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFIEDELDIFGKTSDIGQAAERRLMTS
QSNLISQMGEGGRRTQEPPVSLLLLLQNQHTQPFTALSCLDYMSSNNRQALPCMNWSYDR
LQADSNDSWVECFNALEQARQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSSQDV
VRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPLPIP
TLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLNGAKTFFRDLSA
VYEMCRLGQHKPICKVLRDGIVRVGKTVAQKLTDEHVSDWFNQPWSTEECDNHSRLKLYA
QVCRHHLAPYLATLQLDSSLLLPPKHQTPAPANHTQKVPGNTGAAPANSTCLSAAGAPST
GSSFNSTPSGGTTSLPAGSSSSSGSSVPQLSASSAAAGVNQMAATSTPGFSGNIGSGQNA
SAGGSAADRSQGSAGPGGDTESGQTIPQQQQEGQEGITERERVGIPTEAESADSNAYPPA
VVIYMVDPFTYTADEESASTNFWLLGLMRCYTEMLDNLPENMRDSFILQIVPCQYMLQTM
KDEQVFYIQHLKSLAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLY
SPPFILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCIV
NIDVPNRSRRSKLSARKIGLQKLWEWCIGIIQMTSLPWRVVIGRLGRLGHGELKDWSILL
GECSLQTISKQLKEVCRMCGISSADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRST
ALNLQSSQLNTPQDASCTHILVFPTSATIQVAPANYPNEDGFSPTNDDMFDLPFPDDMDN
DIRILITGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLAL
GYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHPL
DSKTTSDVLRFVLEQYNALSWLTCNPATQDRSSCLPVHFVVLTQLYNAIMNLL
NT seq
6642 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagcgggcggctgggtggcgaacggggccagcctggaggactgccactccaac
ctcttctcgctggctgaactcacaggcatcaaatggcgtagatacaattttgaaggtcat
ggagactgtggcccgatcatctcagccccagcccaggatgatcccattctgctcagcttc
atccgctgcttgcaggccaacttgctgtgtgtgtggcgccgggacgtcaaaccggactgt
aaggaactgtggatattctggtggggagatgaaccaaatcttgtcgatgtgatacatcgc
gaattgcacatggtagaagaaggattgtgggagaatggactttcctacgagtgcaggacc
ctgctcttcaaagcaattcataatcttctggaaaggtgcttgatggataaaaactttgta
agaatcggcaagtggttcgtaagaccctacgacaaggatgagaagcctgtcaataaaagt
gaacatttgtcttgtgccttcacattctttcttcatggggaaagcaatgtgtgcacaagt
gtggagattgctcagcaccagccaatctacctgatcaacgaagagcatatccacatggcc
cagtcctcgccatcgcccttccaagttctggtgagtccctatggtttaaatgggacgctc
acgggccagtcgtataagatgtcagacccggcaactcggaaattgatggaagaatggcag
tatttttaccctacggtgctgaagaaaaaagaagggatgaaggaggaagaagagttgggc
tatgacagtgatttccctgtggcagttgaagtcattgttggtggtgtaaggatggtctat
ccttcagcctttgttctcatctcccagagtgacatccccatgtcacagaacactgccaat
actggaggccatatgaatgtgggacagcaggggcttggaagcatgaaagatcctgctagt
acctgtgggatgccgctcactccacccacttctccagagcaggcccttatgggagaaggt
ggatgctcccagagcagcatcagccattctgcggtgcaggaggggacggtcagtgtgcac
agtccaaagaaatcaggcaagattactgcaaaattgcacaatcgcatggttcaccgtgtc
tggaaggaatgcattctcaacaggtcacaatccaggaggaaacaaattacaactgcaaat
ttggaagaggaagttcctaaaaaaattgtttcttgggattttgtggatccagtccaaaga
gtccgttgttcttgtttcaggcacaaggttttcaaacagcgttttgctgctggctccggc
cgtcccccaacgataaatcagccaggattcagtgtgggaacatcatcatccttgccacct
cccgcctcttcaaagcacaaaacgacagagagacaggaaaaaggagaaaaactgcaaaaa
cggccaatgatgccctttcaccatcggccctctgtgactgaagagctatgcatggagcag
gactcatcagggcagaaactgggattagcaggaatggagccctctttagaagtctctaat
tccagaaagtacgagaagccgctatctatacctgctagaaatccaagcaagcaaatgaat
atgaatcctatggattcaccccattcccctacttccccgctgcctcccacccttagcccc
cagccgagaggtcaggaggcagagaatctggacccgccttccgtacctgtaaacccagcg
ctctacggcagcgggctggagctgcagccactgcccagcttagatgagaggacagtcctt
gtcggacagaggttacctctgatggcagaggtcagcgagacggcgttgtaccgtggggtg
gcgcagaacagcgagtcgctgtggaagtcctataaagtcctgtcgagtgacgatccagaa
ttcaggctcccgaatcttccgtgtgagagatacgataccaagatggaaataaactcagac
agcactgcactgaaaaggctcttaggacaacctaataaacggtttaaaatcctgaggcag
cagaaaccagtgcagacactgaactaccttgaccccttgtctctaatacaaccacctgga
gaaggcttgggagacatgagcgatccgtacacattcgaagatggggacatcaaatacagc
ttcactggcaataaaaaatgcaaacttggggctgagaaagatccgctgaaaaagagcaag
tcagaagatggaattggtaccaaggacatccccgcaacgggtcattccacaccagttcct
gatggaaaagatgccatgtctattttcagttctgctcccaagtctgatacccggcaagac
aacgctgcaagccgagcaggctctggtagcctcacccaggtgactgatctggctccatcg
cttcatgatctggataatatctttgacaattccgatgaagatgagcttggtgctgtatca
ccagctcttcggtcatcaaaaacacccgcagttgcgtctgaggagcgccctgtggggaag
gacggcaggacagcagtaccgtacccgccaactgtggcagatctccaaaggatgttccca
acaccgccgtctttagaacaacaccctgccttctctccagtaatgagctataaggatgga
ataagttcagagaccgtgactgccttgggaatgatggaaagtcccatggtcaacatggtt
ccatcacagcttgctgagtttaaaatggaggtggaagatggattaggtagccctaaacct
gaagatattaaggatttttcgtacgtgcacagagttccatcatttcaaccttttgtgggc
tcatctctctttgctccactgaagatgctgccaagtcagtgcctcctacctctgaagata
ccagatgcctgcattttcaggccttcttgggctgttcctcctaaaattgaacaacttcct
ttgccacctgcagccactttcattagagatggctacaacaatgtgcctagcgttgggagt
ttggccgaccaggactatcttcagatgaacactccccagatgaacacgcccgtgacgcta
aacagcacagctccggccagcaacagcggggcaggagttctgccgtcaccagcaactccg
cgcttctctgtccctaccccgcgcactcccaggaccccaaggactcctagaggtgggggt
actgcaagcggccaaggatctgtaaaatatgacagcacagatcaaggttcacctgcttct
accccatctaccacgcggccgctgaattccgtggagccagccaccgttcagccgatcccc
gaagcccacagcctttacgtcaccttgattctttcagactcggtgttgaacatcttcaaa
gaccgtaactttgacagttgttgtatctgcgcctgtaacatgaacattaaaggtgcggat
gttggattatacatcccagactcgtctaacgaggatcagtaccgttgcacctgtggcttt
agcgcgatcatgaaccgcaaattaggttacaactctgggctcttcatcgaggacgagctg
gatatttttggcaagacctcagacattggccaagctgcagaaagacgactgatgacgagt
caaagcaacttgatctctcagatgggagagggaggtagaaggacccaagaacctccggtg
agcctcctcctcctcctgcagaaccagcacacgcagccgttcacagctctgagctgtctg
gactacatgtcctccaacaaccgccaggcgctcccctgtatgaactggagttacgacagg
ctgcaggctgacagtaacgactcctgggtggaatgcttcaatgccctcgagcaagccagg
cagtatgtggacaaccccactggtggaaaggtggacgaagccctagtaagaagtgccacg
gtacattcttggcctcacagcaatgtgttggatatcagcatgctctcctcccaggacgtg
gtgcgcatgctgctgtcgctgcagccttttctccaggatgccatccagaagaagcgaaca
ggaaggacctgggagaacatccagcatgtgcagggaccactcacttggcagcagttccat
aagatggcaggacggggaacctatggctctgaggaatctcctgagcctcttccgatcccg
actttactagtggggtatgacaaggacttcctgacaatctctccgttctccctgcccttc
tgggagaggctgttgctggacccgtacgggggccatcgggatgtcgcctacatcgtggtg
tgtccagaaaatgaggccttgctcaatggagccaaaactttcttcagggacttgagtgct
gtatatgagatgtgtagacttggccagcacaaaccaatctgcaaagtgttacgtgatggg
atcgtgcgggtgggaaagactgtggcacaaaagctaacggatgagcacgtgagcgactgg
tttaaccagccctggagcactgaggagtgcgacaatcattccagactcaaactttatgcg
caagtttgccggcatcacctagcaccttacttagccactctgcagcttgacagcagcctc
ttgctaccaccgaagcaccaaaccccagcgcccgcaaaccacacacagaaagtaccaggg
aacactggagctgcgcccgcaaactccacatgtctttcagctgctggggcaccatcgaca
ggcagttcttttaactccactcccagtggtgggaccacgagccttcctgcaggaagcagt
tcatcctctggatcgtctgtgccacagctgtcagcatcttctgccgcagccggcgttaac
cagatggccgctacctccactccagggtttagtgggaacattggttcagggcaaaacgcc
agcgctggaggaagtgcagcagaccgctcgcaaggaagtgcaggtcctggaggagacaca
gaatcaggtcaaaccataccacaacagcaacaagaaggacaggaaggcattacagagagg
gagcgagtagggattcccacagaagcagagtctgcggacagcaatgcctaccccccagcg
gttgtcatctacatggtagatcccttcacctacactgcagatgaagaatctgcctccacc
aacttctggctgttgggtttgatgagatgctacacagagatgttggataacttgcctgag
aacatgagggattctttcattctccagattgtgccttgccagtacatgctgcagacaatg
aaggatgaacaggttttctacatccagcacttgaagtctctggcgttttccgtgtactgc
cagtgcaggaggccactgcccacccagattcacatcaagtctctcacaggctttgggcca
gctgccagcatcgaaatgaccctcaaaaatcctgagaggcccagcccaatccagctatac
tcgccacctttcatactggcacccatcaaagacaaacagacagagctgggagaaacattc
ggagaggccagtcagaaatacaacgtgcttttcgttggatattgtttgtcccatgatcag
cgttggcttctggcatcctgtactgaccttcatggggaactgctggaaacctgcatagtc
aatatcgatgtaccaaacaggtcaaggaggagcaagttgtctgcacgtaagatcggcctg
cagaagctctgggaatggtgcattggtatcatacagatgacgtcactgccgtggagagtt
gtaatcgggcggctcgggcgccttggccacggggagctgaaagactggagtatcctcctc
ggggagtgttccctgcagacaatcagcaaacagctaaaggaggtgtgccgcatgtgtggc
atctcatcagcagactctccttctatcctcagtgcctgcttagtggccatggagccgcag
gggtcgtttgttgtgatgccagatgctgtcacgatgggatcggtgtttgggcggagtacg
gcactgaatctgcagtcgtctcagctcaacacccctcaggatgcctcctgtacacacatc
ctggttttcccaacctcggcgactatccaggtggcaccagcgaattaccccaatgaggat
ggattcagccctactaatgatgacatgtttgacctcccattcccagacgacatggacaat
gacattagaattctaataacagggaatcttcactcttcaccaaattcctccccagttcct
tcccctggatcaccatctggcattggagtgggatctcatttccagcatagcaggagccaa
ggggaacgtctcctctccagagaagcccctgaagaactgaagcagcagcctcttgctctc
ggatactttgtgtcaactgccaaagctgagaatcttccacagtggttctggtcatcctgt
cctcaggcacaaaaccagtgtcccctcttcctgaaggcttcattacatcaccacatctct
gtagcacagacagatgagcttctacctgccaggaattcccagcgagttcctcaccccctt
gactctaaaactacatcagatgtcttgaggtttgttttggagcagtacaatgcactgtcc
tggcttacgtgtaaccctgccactcaggatcgcagctcctgccttcctgtccacttcgtg
gtgctcactcagctgtacaatgccatcatgaatttactctga
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