Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138727980
Help
Entry
138727980 CDS
T11607
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5
KO
K13174
THO complex subunit 5
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03013
Nucleocytoplasmic transport
pcur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138727980 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
138727980 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcur03019
]
138727980 (THOC5)
03041 Spliceosome [BR:
pcur03041
]
138727980 (THOC5)
Messenger RNA biogenesis [BR:
pcur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138727980 (THOC5)
Spliceosome [BR:
pcur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138727980 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
138727980
NCBI-ProteinID:
XP_069726985
LinkDB
All DBs
Position
17:5726458..5735797
Genome browser
AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRGKADGDQDARYYSEESEVDLRDPIRDYELYRETCQ
ELQRLMAEIQELKSRGVKDNAAEIDERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAVTL
SEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTIDLKCKDENVL
HLTFYYLMNLNVMTVKAKVTTAVEITTAISAGDLLSPDSLLNCLYPGDHGRKTPNPANQF
QFDKVGIQTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHMELTVKLLR
TRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWTAIPYEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSALPPVFSLCLNWKGERNGSNDDNIRA
MESEVNVNYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEFPQEKMCLR
LVRGPMRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggactccagcaagaagaggaagcccaaagtgatccgcacggatgggggtcca
caggagggcaagcggggcaaggccgatggtgaccaggacgctcggtactacagcgaggag
agcgaggtggatctccgtgaccccatcagagactatgagctctacagagagacgtgtcag
gaactccagaggctgatggctgaaatccaggagctgaagagcaggggcgtcaaggacaac
gctgcagagatagacgagcggcggattcagagctgcgtccacttcatgacactgaagaag
cttaaccggttggctcacattcggctgaagaaagggagagatcaaacccacgaggcaaag
cagaaggtcgatgcctatcacctacagctccagaacttgctctacgaggtgatgcatctg
cagaaagaaatcaccaagtgcctggagttcaagtcaaagcatgaggaaatcgagctcgtg
agcctggaggagttttataaggaggctcctcctgagatcagccggcctgcagtcactctg
tctgagccccaccagcagaccctggcccgcctcgactgggagctggagcagcgcaagagg
ctggcagagaagtacaaggaatgcctgaccagcaaggagaaaatcctgaaggagattgag
gtgaagaaggagtatctaagcagcctccaacctcgcctcaacagcatcatgcaggcctcc
ctgcctgtccaggagtacctcttcatgccttttgaccaggcacacaagcagtacgagaca
gcccgtcacctcccgccacctctctacgttctcttcgttcaagccagtgcctacggtcag
gcctgtgataagaagcttgtggtggccattgaagggagtgtagaggaagccaaagccctg
tacaagccacctgaggactcacaggatgatgaaagtgattctgacgcagaggaggagcag
acaacgaagcggcgcagacccaccctgggtgtgcagctggatgacaagcgcaaggaaatg
ctgaagcggcaccccttgtctgtcaccatcgacctgaaatgcaaggatgagaacgtgctt
cacctgaccttctactacctgatgaacctcaacgtcatgacagtgaaagccaaggtgacc
accgccgttgagatcacaaccgccatcagtgctggcgatctgctctccccagactccctc
ctcaactgcctctatcctggagaccacgggaggaaaacacccaacccggccaaccagttc
cagtttgataaagtgggcatccagaccttgagtgactatgtgacagagctggggcacccc
tacgtgtgggtgcagaagctgggcggcctgcatttccccaaggatcaacctcagcacacg
gtcactgcagacaactcgctgagtgccagccacatggagctcacagtgaagttgctgcgg
acaaggctgcagtcccgcttggctctgcacaagcagtttgcatcgctcgagcacggcgtc
gtgccagtttccagcgagtgccagcatctcttccctaccaagatcgtctcacgcctggtg
aagtggactgccattccctatgaagattatgcggagctgccctacactaaagacgtgata
gaggctggcttggctgaagacacccacctctactacatggccctgatagaacggggaaca
gccaagctccaggctgctgtggtcctgaaccctggttactctgcgctgccgcctgtcttc
agtctgtgcctgaactggaaaggagagcgaaatggcagcaacgacgacaatattcgggcc
atggagagcgaggtcaatgtcaactacaaggagctgtggggacccaaaccgggctaccag
ctcctcaccaaccagctgcagcgcctctgcatggtgctggatgtctacctggagacagag
ccccacgaccccagcgtggagggacccaaggagtttccccaggagaagatgtgtctacgc
ctagtgaggggccccatgcgcctgaagcctttcaagttcaactacccccagggcttcttc
agccaccgatga
DBGET
integrated database retrieval system
