Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138728343
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Entry
138728343 CDS
T11607
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138728343 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcur03041
]
138728343 (PRPF6)
Spliceosome [BR:
pcur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138728343 (PRPF6)
Complex C
U5 SnRNP specific factors
138728343 (PRPF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
TPR_8
FAT
ARM_TT21_2nd
TPR_CcmH_CycH
TPR_1
ARM_TT21_N
ARM_TT21_C
ARM_TT21_5th
TPR_21
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
138728343
NCBI-ProteinID:
XP_069727737
LinkDB
All DBs
Position
18:complement(7727373..7752066)
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AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCDVSKDIENWQKKIGEILVLVAAKLKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgcccctgggctacgtgccgggg
ctgggccgcggagccacaggtttcaccactcgctccgatatcggccctgcgcgcgatgcc
aacgaccccgtggacgaccgtcatgcgccgccagggaagagaacggttggggatcagatg
aaaaagaatcagacggctgatgatgatgatgaggatttgaacgacaccaattacgatgag
ttcaatggctacgctggcagcctgttctcaagcggcccctatgaaaaagatgatgaggaa
gcagatgctatttatgcagctttggataagaggatggatgaacgcaggaaagaaagaagg
gaacaacgagagaaagaagaaatagaaaaataccgtatggagcgacccaaaattcagcag
cagttctcggacttgaaacggaagctggcagaggtgacagaagaagagtggctgagtatt
ccagaagttggtgatgccaggaacaagcgtcagaggaaccctcgttatgagaagctgact
ccggtacctgacagcttctttgcgaaacacctgcagtcgggggagaaccacacttctgtg
gacccgcgccagacgcaatttggtggattgaatactccgtatccagggggcttgaatact
ccatatccaggaggaatgacaccaggcttaatgacacctgggacgggtgaattggatatg
aggaagattggccaagccagaaacaccttgatggacatgaggctgagccaggtgtcggat
tctgtgagcggccagactgtagtggacccaaaaggatatttgacagacttgaattccatg
attcctacacatggaggagacatcaatgatatcaagaaggcccgtttgctcctgaaatct
gtacgagagaccaatcctcaccatcccccagcctggatagcatcagcccgactggaggag
gtcactggcaaactccaagtagctcgaaacctcatcatgaaggggacggagatgtgcccc
aagagtgaagatgtttggttagaagctgctcggcttcagccgggggatacggccaaggct
gttgtggcccaagctgtccgccaccttccgcaatctgtccgaatctatatacgagcagca
gagctggagacagatatccgtgcaaagaaacgcgtccttaggaaagcccttgagcatgtt
ccaaattcggtgcgtttgtggaaagcagctgtggagttagaagaacctgaggatgccagg
atcatgctgagtcgggctgtggagtgctgtccgacgagtgtcgaactgtggcttgcgctg
gcaagactggagacatacgagaatgctcgtaaagtccttaacaaagcccgcgagaacatt
ccaaccgatcgtcacatctggattactgctgccaaactggaggaagctaatggaaacacc
cagatggtggagaaaatcattgacagagccatcacatctcttagggctaatggtgtggaa
atcaacagagagcagtggatacaggatgctgaggaatgtgataaagctggaagtgtggcc
acatgccaggcaatcatgcgagctgtgattggcattgggattgaggaagaagataggaaa
catacctggatggaagatgctgacagttgtgttgctcataatgccctggagtgtgcccga
gcgatttatgcttatgccttgcaagtcttcccgagcaagaagagtgtgtggctgcgggca
gcgtactttgaaaagaaccatggaacgagagaatccttggaggctcttttgcagagagct
gttgctcactgtcccaaagcagaagtgctctggctcatgggagccaaatccaagtggctg
gcaggagatgtgccagcagccagaagcattttggccttggctttccaggccaaccccaac
agtgaggagatctggctggctgccgtgaagctcgagtcagaaaacaatgaatatgaaaga
gcgaggaggctgctggcaaaagctcgcagcagtgcccccactgcaagggtcttcatgaag
tctgtgaagctggaatgggtgcttgggaatattgctgcagcgcaggagctttgtgaagaa
gccctgaagcactacgaggacttccccaaactgtggatgatgaagggacaaatagaggaa
caaaaggagctggtagagaaggcacgggaggcgtataaccaagggttgaaaaagtgcccc
cattccatcccgctgtggcttttgctgtctaggctagaggagaaggtcgggcagttgact
cgagcaagagccatcttggaaaagtctcgcctaaagaatccaaagaatcctgatctctgg
ttggagtcggtgcgactggagtacagagctggattaaagaatattgcaaatactctgatg
gccaaggcgctgcaggagtgccccaattcaggaatcctgtggtcggaggcaattttcctt
gaagcgcgaccgcaacgaaagaccaagagtgtggatgctctcaagaagtgtgaacatgac
ccacatgtcctgttggctgtggccaagctgttctggagcgagcgtaaaataaccaaggcc
cgagagtggttccaccgaacagtgaagatcgactctgacctgggagatgcctgggctttc
ttttacaaatttgagctccagcatgggacagaggaacaacaagaagaggtgaggaagcgc
tgtgagaatgccgaacctcgccacggagagctctggtgtgatgtctccaaggacatcgag
aattggcagaaaaagatcggagagattctcgtgctcgtggcagccaagcttaaaaacacc
ttctag
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