Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138728985
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Entry
138728985 CDS
T11607
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03013
Nucleocytoplasmic transport
pcur03015
mRNA surveillance pathway
pcur03040
Spliceosome
pcur05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138728985 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
138728985 (ALYREF)
03015 mRNA surveillance pathway
138728985 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138728985 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcur03019
]
138728985 (ALYREF)
03041 Spliceosome [BR:
pcur03041
]
138728985 (ALYREF)
Messenger RNA biogenesis [BR:
pcur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138728985 (ALYREF)
TREX complex
138728985 (ALYREF)
Spliceosome [BR:
pcur03041
]
Complex C
Other components
EJC/TREX
138728985 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138728985 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
138728985
NCBI-ProteinID:
XP_069728878
LinkDB
All DBs
Position
19:7936160..7940204
Genome browser
AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGAGRGGGRGGRGRGGATRGAGPGRGGAGAGRAGGGGPVRN
RPLMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIDTQRRPAQSVNRGGMTRTRGATGGFGGGGGNRRGARGGSRGRGRGAGRTSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgatatcatcaagctgaaccgcagccagcgc
ggcgccggccggggcggcggccggggaggccgaggccgcggcggagccacccgcggggcc
gggcccgggcggggcggcgcgggggccgggcgggcgggcggcggcggccccgtgcggaac
cggccgctcatggcgcggggcggcggcaggaaccggcccgcgccctacagccggccaaag
caactcccagagaagtggcagcatgacctgttcgacagcggctttggggcaggggctggt
gtggagaccggtggaaagctgcttgtttccaacctggattttggcgtctcggatgcggac
atccaggaactctttgcagaatttgggaccttgaagaaggcggccgtgcactatgaccgg
tccggccgcagcctggggacagcggacgtgcacttcgagaggaaggcagacgctctgaag
gcaatgaagcagtacaacggggtccccttggatggccgacccatgaacatccagctggtc
acatcacagatcgacacacagcgcagacccgcacagagtgtaaacagaggtggcatgacc
aggacccgtggcgctacaggaggatttgggggtggaggcggcaataggcgaggagctcgt
ggtgggagcagagggagaggcagaggagccgggagaacttccaaacagcagctctccgca
gaggaactagatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
