Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138729012
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Entry
138729012 CDS
T11607
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcur03019
]
138729012 (TNRC6C)
03036 Chromosome and associated proteins [BR:
pcur03036
]
138729012 (TNRC6C)
Messenger RNA biogenesis [BR:
pcur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138729012 (TNRC6C)
Chromosome and associated proteins [BR:
pcur03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138729012 (TNRC6C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_Ucp12
UBA_HERC2
RRM_ACIN1
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
138729012
NCBI-ProteinID:
XP_069728948
LinkDB
All DBs
Position
19:complement(6541064..6754597)
Genome browser
AA seq
1972 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTSLSQPQPAGTGTSTSTSTIPNSSNG
KRAPANGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPAGTLTGASPAQGTGQGGASP
PPQQGAGGQHHPSKTQTDLSHSGLGDHYENSHWGQQPAFRSEGNCSWDKVIIDRTDKEAW
PSITGAETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQS
TSNQSALGAGGANGNGNSARVWGVAAGSSSGLAHCSASGGDGKMDNMMGDGRSQNCWGAS
NSNAGINLNLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGA
WGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGM
AVGMGAIIPPHLQGLPGANGTSVSQVSGGSGEGMGSSVWGMSPGNPATGNSNSGFSQGNG
DTVNSALSAKQNGSSSAVQKEGNGTSAWDSGPPSGPGVLAWGRGGSNGGVGSVHSGAWGH
PNRNTSNGVNGEWGKAPNQHSNSDINGKGSTGWDSSSVTSPNPAMQQGNEQINSWAKAAA
SGTTASEGSNDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWG
QTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWV
NSPPAAVPTNTGWGDNNNKAPNGPAGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSPT
WGEPQKPKSQNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDNRSGSGWN
DSTRSGTSGWGNGTNSKANTGTSWGESLKLGPQQNWANKPQDNNVSNWGGAASVKQTGSG
WVGGPVPAKQKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPI
IQSSTTTNTTTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPAGWGEMPTVHTKTEASWGE
PSSPSAAVDNGTSAWGKPPSSGTGWGDNPAEPTGTYGRTNTPAAAPALCKPASKSMQEGW
GSGGDEVNLSTSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKPKTNPRLSLGTFW
RTERKRLLKDFVIEKLHRDLLKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAEEALKSN
NMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISKESSMDRPTFLDKLTL
SFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQIPSGN
LGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLS
PAQLTSPINNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTINN
MQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGLPDLQTKEQQS
SPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMDNLSSAASSLD
QNSSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRAKTDSDKI
SNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGS
SPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPISHTQASLS
HELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDSSGRTSSWLVL
RNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTT
ILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGTNQTRLGSSSSSHGLVRTDAGHWNPPCL
GGKGSSDLLWGGVPQYSSSLWGPPSADDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagtttaagccagccc
caacctgccggtaccggtaccagtacttccaccagcactattcccaacagcagcaatggc
aagcgtgcgcctgctaatgggcagcagccagccgcgtcccgttacctgcctcgagaggtg
cctccacgcttccgccagcaagaacagaagcagctcctaaagcggggtcagccactgccc
gctgggactctgaccggcgccagcccagcacaaggtaccggacaaggaggggcgagtcct
cctccgcagcaaggagcagggggacagcatcatcccagtaagacccaaacagatctcagc
cacagtggattgggagaccattatgagaattcccactggggacagcagcccgctttcagg
agtgaaggcaactgcagctgggataaagtgataatagacaggactgacaaggaagcgtgg
ccttccattaccggagctgagactgagtctgcctcagaatgtactacagacactgactct
gcctccaactgtggctcagagaacagtagcatggctacagggagtgcccaaggcaacttc
actggacatacaaagaaaactaatggcaataatggcgccaacggagcactcgtccaaagc
acttctaaccagagtgcccttggagctggtggagcaaacggcaacggcaactcggccaga
gtttggggtgtggctgcgggctccagctctggcctagctcactgctctgccagcggcggg
gatggaaagatggacaacatgatgggagatggtagaagtcagaactgctggggtgcttcc
aactcgaatgctggcattaatcttaaccttaaccctaatgccaatccagctgcctggcct
gtacttggacatgaaggaactgtgggagcaggcaacccttccagtatttgcagtccggtc
agtgccataggtcagaacatgggcaaccagaatgggaacccaacaggcaccttaggtgct
tggggaaacttgctgccgcaagagagcacagaaccacaaacgtccacttctcagaatgtg
tctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaaccccatg
aactcttcaccaaaccctatcaatgcaatgcagacaaatggactgccgaactgggggatg
gctgttggtatgggggccatcatcccgccccacctgcaaggccttcctggtgctaacgga
acatcagtttctcaagtcagtgggggcagtggtgaaggaatgggcagttcagtgtggggg
atgtccccaggtaatcctgccacaggaaacagtaattctgggttcagtcaggggaatgga
gacactgtgaactcagcgttaagtgctaaacaaaatggatccagcagtgctgtgcaaaag
gaaggaaatggaacgagcgcctgggattcggggcctccttctggtcctggggtactagcg
tggggccggggcggtagcaatggcggtgttggtagtgtgcattctggagcttggggccac
cccaaccgtaacaccagtaacggtgtgaacggtgagtggggcaaggccccaaaccagcat
tccaatagcgacatcaatgggaaaggatcaacagggtgggatagctctagcgttaccagt
ccgaatcctgccatgcagcagggcaatgaacaaataaactcttgggccaaagctgcagca
tctggcaccacagctagcgaaggaagtaatgacagcggtgggagtcaaaatgaaggcagt
actgggagggagggggctggagagggcaggaggagagacaaagggatgatagaccaaggg
caagttcagttgccaagaaacgaccttgaccccagggtcctgtccaatacggggtgggga
cagacccctgtaaagcaaaacactgcctgggaatttgaagagtccccaaggtctgaacga
aagaatgacaatggaacagaggcctggggttgtgcagctactcagtcttcaaactcaggg
gggaagaacgatgggtccatcatgaacagtacaaatacctcttcagtatctgggtgggtc
aactctccaccggcagctgttccaacaaatacaggttggggagacaataacaacaaagca
ccaaatggcccagcgggatggggagagtcagcaagctctactactgttaataatgctgct
gctgccaaaagcggccacgcttggagtgggaccgccaatcaggaggacaaatcgcctacc
tggggtgaacctcagaaacccaaatctcaaaactggggagatggacagaaatcgaatcca
agctggacttcaggaggtggagattggacagattcatcatctgttcctggacatttgggt
gatgggaagaaaaatggatctggatgggattctgacaatagatcggggtctggttggaat
gattccacaaggtctgggaccagtggttggggaaatggcacaaacagcaaggctaataca
ggtacaagttggggggaatctttaaaactaggcccccaacaaaactgggctaataaaccc
caggacaacaatgtgagtaactggggaggagctgcttctgtaaaacagacggggtcaggg
tgggttggtgggccagtgccagccaaacaaaaagagaactgtgaggcaactggctgggaa
gagccatctccaccgtccattcgccgcaagatggaaattgatgatggtacctcagcgtgg
ggcgacccaaattacaacaacaacaagactgtaaacatgtgggatagaaataatcctata
atccagagcagtaccacaaccaataccaccaccactagcaccattatcaacacaaatatg
gttgaacctcagccatcgcaccagtcaagtgcccagccgaaccggtccccgctgcttggt
ccagcaggctggggagaaatgcctactgtccacaccaagaccgaagcttcttggggagag
ccgtcctccccttctgctgcagttgataatggcacttcggcctgggggaagccccccagc
agtggtacagggtggggagataatcctgccgagccgacagggacctatggaagaacaaac
actccagctgctgccccagcactgtgcaaaccagcttcaaaatctatgcaagaaggctgg
ggcagtggtggggatgaagtgaatctcagtactagtcagtgggaagatgaagaaggagat
atgtggaataatactgcttcacaagagagcagctcctcctgtaattcctgggggaacgcc
ccgaagaaaggacttcaaaagcccaaaacaaatccacgcttgtcccttggtactttctgg
agaactgaaaggaagagacttcttaaggattttgtgatagaaaagctgcacagagatctt
ttaaagggcatgaagacatctagcaagcaagatgaggcctggatcatgaaccgcctgatc
aaacagctcacagacatgggcttccctagagagccagcggaagaggccttgaagagcaac
aatatgaatctcgatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaag
cgtggaatgggagtgaccgactataatggaatggtcaccaaaccccttggctgccgccca
ccaccaatctccaaagagtcttccatggaccgccccaccttccttgacaagctcaccctt
tctttctccaatcaggatggcggcctagtggaagagcccactacttcaccatttttgcct
tcaccaagcctgaagctccccctttcaaacagtgcactccctaatcagaccctgggtggg
attgcctcagggctgggcatgcaaaacttgaattcttctagacagataccgagtggcaat
ctgggtatgtttggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaa
ccgccagtgcaacctcttaattcatcccagcctagtcttcgtgctcaagtgcctcagttt
ctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcagc
cctgcacagttaacctcgccaattaataatcctcagcatatgacgatgttgaaccagctc
tatcagctgcagctggcgtaccaacgtttacaaatccagcagcagatgttacaggctcag
cgtaacgtttccggacccatgagacaacaggagcagcaagttgcacgtacaatcaataac
atgcagcagcagatccagcagcaccagcgccagctggcccaggccctgctgatgaagcag
cagcctccccctccacatctatctttgcacccctctgcaggcaaatcagccatggatagc
ttttcaccccatccccaggctcccggccttcctgacctgcagaccaaagagcaacagtct
tcaccgaacacctttgctccttaccctcttgctggactgaacccgaacatgaatgtaaat
aacatggacattactggtggtttgtcagtgaaggacacttctcagtcccagtctcgcctt
cctcagtggacacaccccaactcaatggataatctgtctagtgctgcttcttcacttgac
cagaactccagcaagcacggtgctatacctggaggtttaagtattggtcctccgggaaag
tcctccattgatgactcttacggccggtatgatctgattcaaaacagtgaatcacctgcc
agtccgcccgtagctgttcctcacagctggtcacgtgccaaaaccgatagtgataaaatt
tccaatggctccagcataaactggccaccagagtttcatccaggagtgccatggaaagga
ctgcagaacattgatcctgaaaatgaccccgatgttactcctggaagtgttcctactggt
cctaccataaacaccacaatacaggatgttaatcgctatcttctcaagagtggagggtca
tccccaacatcatctcagaatgccacgctgccttcatcgagtgcctggccgcttagtgcc
tccggctacagtagctctttcagcagcattgcatccgcacctagcattgcaggtaaactg
tcagacatcaagtctacgtggtcctctggcccaatctctcacacgcaagcctctctatcc
catgaactatggaaggtacccagaaacactactgctcctacgagaccgcctccaggctta
accaacaccaagccatcatctacatggggtgccagtcccctgggttggaccagctcctac
tcctctggttctgcatggagtactgacagctcagggagaacaagcagctggctggttctt
cgcaacctcacaccccagattgatggttccacactgcggacactgtgtttgcaacatggc
cctctaataacattccacttgaacctgacgcaagggaatgctgtggtccgatacagttcc
aaggaagaagcagccaaggcccaaaagtctctgcatatgtgtgtcctgggaaacactacc
atcctggccgagtttgctggggaagaggaagtcaaccgtttcttagcacaaggccagcca
ctgccgcccacctccagctggcagtccaacactggaaccaaccagactcgcctgggctcc
tcgagcagctcgcacggcttggtgcgcaccgacgccggccactggaaccccccctgcctg
gggggcaagggcagcagcgacctgctgtggggtggggtgcctcagtactccagcagcctt
tggggaccccccagcgccgacgacggcagagtcattggcagcccgacacctttgaatact
cttcttccgggtgatcttctcagtggggagtccatctag
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