Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138729450
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Entry
138729450 CDS
T11607
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138729450 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcur03019
]
138729450 (NUP188)
Messenger RNA biogenesis [BR:
pcur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138729450 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
138729450
NCBI-ProteinID:
XP_069729804
LinkDB
All DBs
Position
20:7186885..7214040
Genome browser
AA seq
1737 aa
AA seq
DB search
MAPGGLSARSSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLSYYKPPSTDSAEKIK
ADKDVAAPLKELGLRVSKFLGLDEEQSVQLLQLYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALYK
AEAPTWETHGNLMTERQVSRWFMQCLREQSMLLEVIFLYYAYFEMAPDELLAFAKMFREQ
GFGTRQTNRHLIDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNERI
HQEMDNQLLQLGDVSHHAPVLLAWALLRHTVNPEEATNIIRRMGSTAIQLNVFQYLTKLL
QSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGSQQDIIDAACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVISPPVDVIASCVNCLTVLAAWMPAKVWTDLHHTGFLPFVANPVSSMNHMISAEGMNAG
GYGNLLMSIEQPQGEYSVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDDSDGSKEFSLGEWSCLQVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP
PSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSDYVKLLA
HHVAETEGSSCASVTEYQMLISAWRMLLIISTSHADIMHLTDPADRQQLFLDVLNGTKAL
LLVPMSVSCLQLGSMLCTLLLILLKQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTK
AKVFSALITVLQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDATDDKD
SMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFATLEIS
LRAKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSAS
SRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
ACLEEADHTVGFILQLSNFKKEWHFHLPQLMRDVQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKCLAALRHFT
PDVCQILLDQSLDLAEYNMLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKE
PFPQAAGLNTQEGTKILKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSSTKLGPEGQEPLFQLVQAFVRHVQR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgggcgggctgagtgcgaggagcagcagagaattgtggacgattctcctgggc
agatcagctttaagagaaccagcacagatcgcagcagaactgaacaagcattggcagagg
ttgttagagggactttcatactataaaccgccaagcacggactcggcagaaaaaataaaa
gctgataaagatgtggctgctcccttgaaagagctgggtctgagggtcagcaagtttttg
ggtctggatgaagagcagagtgtacagttgttacagttatatcttcaagaggattacaga
ggaacaagggactccctgaagacagttcttcaggatgaaaggcagagtcaggctctgatg
ctgaagcttgccgactattactatgaagagaggatctgcattctgcgctgtgtcctccac
ctgctcacttattttcaggatgagagacacccttacacagcacaatacttccaatgtgtt
gagaagttggacaaggagctagttcctaattaccggaaacagttcgaagcgctgtacaaa
gcagaagctcctacgtgggaaacgcatggaaatcttatgacagaacgccaggtttcccgt
tggtttatgcaatgccttcgtgaacagtccatgctcctggaagtcatctttctctactat
gcatactttgaaatggcacctgatgagcttctggcttttgcaaagatgttcagagaacag
ggatttggcacgaggcaaaccaacagacatttgatagatgagagcatggatcacctggtg
gatcgtattggctactttagtgctcttattctggtggaaggcatggaaatcgactccctc
catgagcgtgctttggatgacaggacagaggagcacaagttagccaataatgaacgcatc
caccaggagatggacaatcagctgctgcagctgggggatgtctcacaccacgctccggtg
cttttggcctgggctcttctccgtcacactgtaaaccccgaggaggccacaaacattatc
aggagaatgggcagcactgctatccagctcaatgttttccagtatctaacaaagcttctg
cagtcgttgagcagtggggggaagaattgcactgccagcacagcttgcatgtgtatctat
ggacttctttcctttgtcctcacatcactggagttacatacgttgggcagtcagcaggat
ataattgatgctgcatgtgaagttctggcagcttccagtattcctcagctcttctggaag
acagaacctactgcgggtctgggcattatcctggacagtgtgtgtgggatgttcccacat
cttctcactcctcttcttcagctgctccaagcccttgtgtctgataagtctactgcaaaa
aaggtatacagtttcctggataaaatgtccttctatattgaactgtacaagcataaacct
cctgacgtgatctctcacgaagatggcacgctttggcgaagacaggctccaaagctcctc
tatcctctcggactaggtcagacaaatctgcggatacctcagggaacagtgggccaagtg
atgctggatgatcgggcatatttggtacggtgggagtattcctacagcagctggacactg
ttcacctgtgagattgagatgctgctccatgttgtatcgacagcagatgtgattcagcat
tgccagagggtcaagccaataattgatctggttcataaagtcatcagtactgatgtatcg
atagcagattgccttctgcccatcacgtcgcggatctacatgctcctgcagaggctaaca
actgtcatctctccccctgtggatgttatagcgtcttgtgtcaattgtttgacagtactg
gctgcttggatgccagccaaggtctggactgaccttcaccacacagggttcttaccattt
gttgccaatcctgtatccagtatgaatcacatgattagtgcagagggaatgaatgctggg
ggctatggaaacttgttgatgagcatagaacagcctcaaggcgagtacagcgttaccatc
tccttcctgaacctgatcacaacccttgtccggggacaacttggtagcacccagagccaa
ggactcgtgccttgcattgtgtttgtcctaaaggagatgttaccaaattaccacaaatgg
cgttacaactctcatggagtgagagagaaaattggatgccttattctgcagctgatccat
gctatactgaatttatgccctgaaatggatcctcgcagcagcaatgcccccagccttcag
tccctgtgcatcttcagcttggccaacacagaagcagggcaagctgtcattaacatcatg
ggaatcggtgtggacaccatcgatatggtaatggcctcccagtctagcagtgatgagtca
caaggtcaaggtcagttgctgatccagacggttaagctggcattctcggttaccaataac
gtcatccgactgaagcccccctctagcgtggtctctccgctagaacaggcacttactcag
catggtgctcatggaaacaatcttattgcggtcttggccaaatacatctaccacaagcac
gatcctgcactcccacgcctggccatccagttgctcaagcgattggctacggttgctccc
atgtctgtttatgcctgccttggtagtgatgctgctgctatccgcgatgccttcctcacc
cgcctgcagagcaagattgaggacatgcgtatcaaggtcatgatcctcgagttcctcaca
gttgcggtggagacacaacctgggctcattgagctgttcctgaacttggaagtgaaggat
gacagcgacggctcaaaggaattcagcttaggggagtggagttgcctccaagtggtcttg
gagctgatagactccaaacaacaggagaggtactggtgccctcccctcctgcatcgcgct
gccattgccttcctgcatgctctgtggcaggatcggcgagacagcgccatgctggttctg
aggacaaagccaaagttttgggaaaatttaaccaatcccctctttgggacccttcctccg
ccttccgaatcatcagagctcagtgtcttggatacctgtgccttaatcatgaaaatcatc
tgtttggagatctactatgttgtcaaaggctccctggatcagtccctgaaggacacgctg
aagaatttctccaccaaaaagcgctttgcctattggtcagactatgtgaagttactggct
catcacgtggcagagacagagggcagcagctgtgcctccgtgacggaatatcagatgctg
atctctgcctggcggatgctgctcatcatctccactagccatgcggatataatgcatctg
actgatcctgcagatcgtcagcaattgtttctggatgtgctaaatgggaccaaggctttg
ctcctagttcccatgtcagtctcctgcctgcagctggggtctatgctctgtacccttctc
ctgatcctgctcaaacagtggaagagcgagttgggttctgtggataaaatcataaactcc
ttgacgcagattctggagggagtgctacaggcagatcagcagatgatggagaaaaccaaa
gccaaagtgttctcagctcttatcactgtgctgcaaatgaaggagatgaaagtgaatgag
atcccccagtactcccagctggtgttgagcgtgtgtgaaacactccaggatgaggtcatt
gcgctctttgatcagactcgacacagcctgaccttgggagacgccacagatgacaaggac
agcatggaaacagatgatgcctcccgagttaaacacaaggaccagcgagatggggtgtgt
gttctgggtctgcatctggctaaagagctctgtgaggttgatgaagatggagactactgg
ctgcagattactaggaaagtcccagtgcttcctactatctttgccacattggagatcagc
ctgagagctaaacaaaaccttcatttcacagaagcctcgttgcatttactgctgacctta
gcaaggactcaacagggagcagctgcagtggctggtgctggtgtcacccagagcgtctgc
ctgcccctcctgagtgtgtaccagctcagcaccaacggagccatccagacatctgcttca
tctcgcaagtctctggatgccccttcttggccgggggtctatcgcctctccatgtcgctg
atggaacgcctgcttaaaacactgcgatacaacttcctgacggaagcgctggacttcgtt
ggtgtccatcaagagaggattcttcagtgcctgaatgcagttcggacagtacagagcttg
gcctgtctggaagaggccgatcacactgttggcttcattcttcagctctcaaatttcaaa
aaggagtggcatttccacctgccacagctgatgagagatgtgcaggtgaatctgtgttac
ctgtgccaggcctgtacctccctcctgcacagccgcaagatgctccagcactacctgcag
acaaaaaatggtgattctcttccatcgagtgtgactccacgagtgcagcgtaatccccaa
gcctcctccaaacatcccagccccgagtcagaagcagcagagcagaaagcgctgctcaca
gtgcagtacagcctcctgaaaatcctcagcaaatgtcttgctgccctgcgccatttcacc
cctgatgtctgccagatcctgcttgatcagtcgctggaccttgccgagtacaacatgctc
ttcgttttgagttttaccacaccagcctttgattcagacgtcgccccttcctttgggacc
ctccttgccacagtcaacgtggcccttaacatgctgggagagctggataagaagaaggaa
cctttccctcaggctgcagggctgaatactcaagagggaaccaaaatcctcaagtctctg
ctcatgtttacaatggaaaactgtttctacctgctcatctcccaggccgttcggtacctg
agagacccagctgtgcatccccgcgacaagcagcggatgaaacaggagctcagctctgag
ctgagtactctgctctccagcctgtctcgttacttccgccgcggtggcccctcctcacct
gccagcggggtccttccctctcctcaaggaaaatcttccaccaagctgggtcccgagggg
caggagcctttgtttcagctcgtgcaggcctttgtccggcacgtgcagagatag
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integrated database retrieval system
