Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138729602
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Entry
138729602 CDS
T11607
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcur04121
]
138729602 (TRIM50)
Ubiquitin system [BR:
pcur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138729602 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
PRY
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
U-box
zf-Nse
zf-RING_4
Sina_RING
zf-ANAPC11
CRLF3_N
zf-RING_10
DUF4600
Motif
Other DBs
NCBI-GeneID:
138729602
NCBI-ProteinID:
XP_069730077
LinkDB
All DBs
Position
21:complement(1086812..1091775)
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AA seq
494 aa
AA seq
DB search
MARKMSIDDLEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSEELDRQFLCPVCRQTV
DCSASPPNVTLARVIEALQSRGEAEATPESCPTHHNPLSLFCEADQEVICGLCGTIGNHR
QHKITPISTAYCRMKEELSVLLTDVHRYKRNLDEHFNKLINNKSRIANEADVFKWVIRKE
FQELHRYIDEEKATFLESIEGKASQLIASIESQVRQTSDALQRLKEMQSSLEALSNESQL
DFVRKYGSSQFRSELPSLHPSDGIFSPVSFKPCFHQDDIKITVWKRLHRRVLPAPETLKL
DPVTAHPLLELFKGDTVVQCGLFQRRDSNPKRFDSSNCILTCKGFSCGQHYWEVIVGTRN
HWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVYEAFSTPRATLPLTIRPQRIGIYLH
YEKGELTFYNADNPDELSPIYTFQAEFQGQLYPIVDLCWPERGPYSPPIILPTPAASRHP
RVPTSRAPEEPTKL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaagatgagcatcgacgacttggaggaccagctcctctgtcctatctgcttg
gaggtcttcaaggagcccctgatgctgcagtgtgggcattcgtactgcaagtcgtgtgtg
gtgtcactctctgaagagctggacaggcaattcctgtgccccgtgtgccgccaaacggtg
gactgcagcgcctcgccacccaacgtcacactggcccgcgtcatcgaggcgctgcagagc
cgaggagaggcagaggccaccccagagtcctgcccgacacaccacaaccccctcagcctc
ttctgcgaggctgaccaagaggtgatctgtgggttgtgtggcaccatcggcaaccaccgc
cagcacaagatcacccccatctccaccgcgtattgccggatgaaggaggagctgtctgtg
ctgctgactgatgtccaccgctacaagaggaacttggacgaacacttcaacaagctcatc
aacaacaaaagccgtatcgcaaatgaggcggatgtcttcaagtgggtgatccggaaggag
ttccaggagctgcacaggtacatcgatgaggagaaggccaccttcctggagagtatcgag
gggaaggcatcccagctcatcgcctccattgagtcccaggtcaggcagacgtcagatgcc
ctgcagaggcttaaggagatgcagagctctctggaggcactcagcaacgaaagtcagctt
gattttgtccggaaatacggctcctcccagttcaggtcagagctccccagcttgcacccc
agcgatggcatcttcagcccagtgtcctttaagccgtgcttccaccaagatgacatcaag
ataactgtgtggaagcgcctgcaccgccgggtcctgccagctccggagacgctgaagctg
gatccggtgacagcgcatcccctcctggagctcttcaagggcgacacggttgtgcagtgt
gggctcttccagcgtcgggacagcaaccccaagcgttttgactccagcaactgcatcctc
acctgcaagggcttctcctgcgggcagcactactgggaggtgatcgtgggcaccaggaat
cactggcgcgtgggcatcatcaagggcacggtcagccgcaaagggaagctcagcaagtct
cccgagaacggcgtgtggctcattggcttgaaggaagggaaggtctacgaggccttcagc
accccgcgggccactctgccgctgaccatccggccccagcgcatcggcatctacctgcac
tacgagaagggtgagctgaccttctacaacgctgacaaccctgatgagctcagccccatc
tacaccttccaggcggagttccagggtcaactctaccccatcgtggacctgtgctggccc
gagcgagggccttactcaccccccatcatccttcccacacccgctgccagccggcacccc
cgggtgccgaccagccgtgctcccgaggagcccacgaagctgtag
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integrated database retrieval system
