Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138729830
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Entry
138729830 CDS
T11607
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03030
DNA replication
pcur03420
Nucleotide excision repair
pcur03430
Mismatch repair
pcur03440
Homologous recombination
pcur03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138729830 (RPA1)
03420 Nucleotide excision repair
138729830 (RPA1)
03430 Mismatch repair
138729830 (RPA1)
03440 Homologous recombination
138729830 (RPA1)
03460 Fanconi anemia pathway
138729830 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcur03000
]
138729830 (RPA1)
03032 DNA replication proteins [BR:
pcur03032
]
138729830 (RPA1)
03400 DNA repair and recombination proteins [BR:
pcur03400
]
138729830 (RPA1)
Transcription factors [BR:
pcur03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138729830 (RPA1)
DNA replication proteins [BR:
pcur03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138729830 (RPA1)
DNA repair and recombination proteins [BR:
pcur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138729830 (RPA1)
MMR (mismatch excision repair)
138729830 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
138729830 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
CATSPERD-E_C
RTL1-8_LDOC
Motif
Other DBs
NCBI-GeneID:
138729830
NCBI-ProteinID:
XP_069730495
LinkDB
All DBs
Position
21:complement(10705008..10728257)
Genome browser
AA seq
614 aa
AA seq
DB search
MSARLSEGAIAAIMQGENVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAQCICQVNRYIVNSLKDGRRVVILMDVDVLKTADKVGGNIGNPVPYNEG
QGQQRPSAPAANPAPSKLQPANGNFSVPGPATPKYHPPSNQFSKASAPSSMKAPVGSQAK
VVPIASLNPYQSRWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYSAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFV
SIPDLENTPKDSVVDVIGICKSYEDVTKIVTKSNNREVSKRNVHLMDISGKVVTATLWGN
EAEQFDGSRQPVVAIKGARVSDFGGRSLSVMSSSTVVINPDSPEAFKLRGWFDAEGQLLE
GTSISDVRGGPTAGANTNWKTLYEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLDYQWVTCFQDTAEFILGQN
AAFMGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYS
KRLIASIRRNAQLG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaggctcagcgagggcgccatcgcggccataatgcaaggggagaacgtctcc
aagcctgtgctgcaagtcatcaatacacgggctatcgctaccggaaatgggcccccacgt
taccgagtgttgatgagcgatggggttaatacactctcctcattcatgttagcaacacag
ctgaactctctggtggaagaggaacgcttatcagcccagtgcatttgccaggttaacaga
tacatcgttaacagcctgaaagatgggaggcgagtggttatactgatggatgtagacgtg
ctgaaaaccgctgataaggtcggtgggaatattggcaacccggtgccgtacaatgaaggg
caagggcagcaacgtccttcagctccagctgcaaacccagcacccagcaaactgcagcca
gcaaacggcaatttttcagtaccaggtcctgctactccaaagtaccatcctccctcaaac
cagttcagtaaagccagtgctcccagctcaatgaaggcaccagtggggtcccaggccaaa
gtggtgccgattgccagcttgaacccgtaccagtccaggtggaccatttgtgctcgtgtt
acccaaaaaggccagatccgcacgtggagcaactcccgtggtgaaggaaagctcttttct
atagagctggttgatgaaagcggtgagattagagctactgcattcaatgatcaagcagac
aagttctttccactcattgaattgaacaaggtatattattttaccaagggcaatttgaag
actgctaacaagcaatattcagctgttaagaatgactacgagatcacattcactaatgag
acttcagttgtgccgtgtgatgatgcccagcatcttccatctgttcagtttgactttgta
tccatccctgacttggagaacacacccaaagactcagttgttgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattgtaacaaaatctaacaatagggaggtatcaaag
aggaacgtgcatctgatggacatatcggggaaagtggtgacagctacgctatggggcaat
gaggctgaacagtttgatggttctagacagcctgtggtagccatcaaaggagcccgagtc
tctgattttggtggcagaagcctgtctgtcatgtcctcgagtacagttgtcatcaaccct
gatagcccagaggcttttaagctccgaggatggtttgacgccgaggggcagctgctggaa
ggtacctcaatctcagatgtgaggggtgggccaacggcaggggctaacaccaattggaaa
actttgtatgaagccaaatctgagaatttgggacaaggagataaggcagattattttagc
tgtgtgggcacagtcgtacatctgcgcaaagagaactgtatgtaccaggcgtgtccctcg
caggattgcaacaagaaagtgatagaccagcaaaatggcctgtatcgttgtgaaaagtgt
gatcgcgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgcggactgt
ctagactatcagtgggtgacttgtttccaggacacagcagaattcattcttgggcaaaat
gcggcttttatgggagaactgaaggaaaagaatgagcaggcgtttgaagaagtgttccaa
aatgcaaacttcaacacatacgagttcaggatccgagtcaaactggagacttacaatgat
gaatctcgtattaaggctacagcaatggatgtcaagcctgtgaactacagagaatacagc
aaaaggttgattgcaagcatcaggagaaatgctcagctaggctga
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