Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138730689
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Entry
138730689 CDS
T11607
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcur03000
]
138730689 (SOX13)
Transcription factors [BR:
pcur03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138730689 (SOX13)
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GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
138730689
NCBI-ProteinID:
XP_069732218
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Position
24:complement(3044474..3088758)
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AA seq
614 aa
AA seq
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MSMRSPVSPPLELDGAGSMVNCTIKTEEKKEGAYESPPGAAPSTEPHPSDPPGPPLKEGT
DPQVLPQESCSPSSDVLEPRRSAFEPAVGSQEKLDFNKNLKEVMPTIEKLLSSDWKERLL
GRNTAESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVAPDSQLA
LPIQPIPCKPVDYPVQLLHSPPPPTLKRPAGSGHLQMQETSQPLNLTAKPKGSDIPSASS
SPSLKMSSCQSLTPSHGATRDLQTSPSNLPLGFLGEGDAITKAIQDARQLLHGHSGAMEA
SLSNPYRKDHVGIDSSPVKERMEDTPAHRLDEAMLGCEMDGSRHFPESRNNNHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPD
YKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQLPPSSSDVLYQRPV
GVQLTPPLMEHYLPRGVDPGMPVIVNTRSLKEGDGGGGGDDGHSVAEGEMYRYSEEEDSE
GEDKSDGELVVLTD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccgtttctccccccctggagctcgatggagcgggcagcatggtg
aactgcaccatcaagacggaggagaagaaggagggcgcctacgagtccccgccgggggct
gcccccagcaccgaaccccatcccagtgacccgccggggccaccgctgaaggagggcacc
gacccccaggtcctgccgcaggagtcctgctcgccctccagtgatgtgctggagcccagg
cgctctgcctttgagccggctgtcggcagccaagagaagttggacttcaacaagaacttg
aaggaagtgatgccaaccattgagaagttactgtccagtgactggaaagagcggctgctg
ggccgaaacactgctgagtccaaggaagtgaaaggaacccaggaaagcctggcagagaag
gagctccagttacttgtcatgatcaaccagctgtccacgctgcgggaccagctcctgacg
gcgcactcggagcagaagaacatggccgcgatgctcttcgagaagcagcagcagcagatg
gagctggcgcggcagcagcaagagcagatcgccaagcagcagcagcagctcatccagcag
cagcacaagatcaacctcctgcagcaacagatccagcaggtcaacatgccctacgtcatg
atccccgcctttacccccagccaccagcctctccccgtcgctcccgactcccagttagcg
cttcccatccagcccatcccctgcaaaccagtggattacccggtgcagctgctgcacagc
ccccctcctcccacgctgaagagacccgccggctcgggccacctccagatgcaggagacc
tcgcagccactgaacctgacggccaaacccaaaggctccgacatccccagtgcctccagc
tcgcccagtttgaagatgagcagctgccagtccctcacgccgagtcacggggccaccagg
gacctgcagaccagcccatccaacctgcctctggggttcctgggcgaaggcgatgccatc
accaaagccatccaggatgcacggcagctgctgcacggccacagtggggccatggaggca
tcgctgagcaatccctaccgcaaggaccacgttgggattgattcttccccagtgaaggag
cgaatggaggacacccctgcccaccggctggacgaagctatgttgggctgtgagatggat
ggctcacggcacttccccgagtccaggaacaacaaccacatcaagcggcccatgaacgcc
ttcatggtgtgggcgaaggatgagaggaggaagattttgcaggccttcccagacatgcac
aactccagtatcagcaagatcttgggctctcggtggaagtccatgacgaaccaggagaag
cagccctactatgaagagcaagcccggctgagccggcagcacctggagaaataccccgac
tataaatacaagccccgacccaaacgcacctgcatcgtggaggggaagcgcctgcgtgtg
ggcgagtacaaggcgctcatgaggaaccggcggcaggacgccaggcagggctacttgata
gggccccagggcagccagctgcccccctcctcctcggatgtgctgtaccagcggccggtg
ggcgtgcagctgaccccccccttgatggagcactacctgccccgcggcgtggaccccggc
atgcccgtcatcgtcaacacgcgcagcctcaaggaaggcgacggcggcggcggcggcgac
gacggccactcggtagccgagggcgagatgtaccgctacagcgaggaggaggactcggag
ggtgaggacaagagtgatggagagctggtggtgctgacggactga
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