Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138731550
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Entry
138731550 CDS
T11607
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138731550 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcur03041
]
138731550 (USP39)
Spliceosome [BR:
pcur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
138731550 (USP39)
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
SR-25
Motif
Other DBs
NCBI-GeneID:
138731550
NCBI-ProteinID:
XP_069733633
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All DBs
Position
27:complement(4211770..4218438)
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AA seq
555 aa
AA seq
DB search
MLSRGKREREPRGGVSSSSSSSSSSFSSSSSSSRVPPRSRRAGEERDRPSRPGRAPGSPA
GSKRVKRERDSEGESEPEPVRYGRFDPEDQRSRHCPYLDTINKSVLDFDFEKLCSISLSH
INVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT
YVLKPTFTAQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLR
NYFLEEENYKGIQRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKN
FQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK
AQLLQNAEYQEMMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGATEKEY
KTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQA
AHANTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQ
IWKRREEDETNQQGA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccgcgggaagcgggagcgggagccccgcggaggcgtctcctcgtcctcctcc
tcctcatcttcctccttctcctcctcttcctcctcgtcgagggtgccgccgcgcagccgg
agggctggggaggagcgggatcggccctcgcgtcccgggcgggccccgggaagccccgcg
ggctccaagcgggtgaagcgggagcgggacagtgagggcgagagcgagccggagcccgtg
cgctatggccgcttcgaccccgaggaccagcgcagccggcactgcccctacctggacacc
atcaacaagagcgtcctggactttgattttgagaagctctgctccatctcgctgtcccac
atcaacgtctacgcctgccttgtctgcgggaaatacttccagggtcgtgggctgaagtct
cacgcctacatccacagcgtccagttcagccaccacgtgttcctcaaccttcacaccctc
aagttttattgcctccctgataactacgagatcatcgactcctccctggaggacatcacg
tacgtgttgaagcccaccttcaccgcccagcagatcgctaatctggacaagcaagccaag
ctctcccgcgcctacgatggcaccacctacctgcccggcatcgtggggctcaacaacatc
aaagccaacgactacgccaacgctgtcctccaggctttatcgaacgtgccgccgttgagg
aattattttttggaagaggagaactacaagggcatccagcgcccgcctggggacatcatg
ttcctgctggtgcagcgttttggggagctcatgaggaagctctggaaccccaggaacttc
aaagcgcacgtctcgcctcatgagatgctgcaagccgtggtcctctgcagcaagaaaaac
ttccagattaccaagcaaggagatggggtggatttcctctcctggttcctcaacgcgttg
cattcagcgctgggcggcacgaaaaagaagaagaagaccatcgttaccgacgtcttccag
ggctccatgcgcattttcactaagaagttgcctcacccagacctgccggccgaggagaag
gcgcagctcctgcagaacgccgagtaccaggagatgatggtggaatccaccttcatgtac
ctgacgctggaccttcccaccgccccgctctacaaggatgagaaggagcaactcatcatt
ccccaggtccctctcttcagcatcttggctaaatttaacggcgccaccgagaaggagtac
aagacctacaaggagaactttctcaagcgcttccagctcaccaagctgcctccctacctc
atcttctgcatcaaacgtttcaccaagaacaattttttcgtggagaagaaccccaccatc
gtcaacttccccatcacgaacgtggacctgcgggagtacctgtcggaagaggtgcaggcg
gcgcacgccaacaccacctacgacctcatcgccaacatcgtgcacgacgggaaaccctcg
gaaggctcctatcgcatccacgtgctgcaccacggcactgggaagtggtacgagctgcag
gacctgcaggtgacagacatcctgccccagatgatcactctttccgaggcgtatatccag
atctggaagcgacgcgaggaggacgagacgaaccagcaaggtgcctga
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