Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138734722
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Entry
138734722 CDS
T11607
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03015
mRNA surveillance pathway
pcur04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138734722 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138734722 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcur03021
]
138734722 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pcur03019
]
138734722 (SYMPK)
Transcription machinery [BR:
pcur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138734722 (SYMPK)
Messenger RNA biogenesis [BR:
pcur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138734722 (SYMPK)
U7-dependent histone pre-mRNA processing factors
138734722 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Cnd1
INTS7_N
PDS5
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
138734722
NCBI-ProteinID:
XP_069738617
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MAGLGGSEGPSVASQFFSEDEGGCDGGATSERVVELLNQAALISSDAKINVLKQVQELII
NKDPTLLDNFLDEIIAFQVDKSIEVRKFVVGFIEEACKRDIELLLKLVANLNMLLKDENV
NVVKKAILTMTQLHRVALQWMVKSKTMSELQEACWDMMSAMAGDIILLLDSDNDGIRTHA
IKFVEGLIITLSPRLPDSDVPKRHENDISLDRIPRDHPYIKYGALWAECRGALEQLLRFM
VHPAISSINLTVALGSLAAIARQRPLFMADVVQAYETLHANLPPTLAKSQVSSVRKNLKL
HLLSVLRHPASADFQPQITTLLGDLGAPPADIARCLPSARDARKRPRDDPDAAAKKIKME
APLGEDDEDKDLEAVAAAAVAKPGGATSGPSDIDITAEFLQPLLTPDNVANLVLISMVYL
PEAMPASFQATYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTRHLKEEPKEEKAA
KPESVVIKRRLSALAQGQAISVLGAPGAASNLLEEETPQAKRRPEPIIPATQPRLAGAGG
RKKVFRLSDVLKPLSEVQVEKLKLSAVTRILRAERAVACSGAAQARVKILAALVTQLEVP
LKSEVLAFILEDVRSRLDLAFAWLFQEYNVYLSHLPGGSLERYDECLIGLLAGLQEKPDQ
KDGIFTKLVLEAPLITESALEVLRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLD
LSSHEKDKVRQQALLFIKRMYEKDQLRDYVEKFALNYLQLLVHPNPPSVLFGADKDTEVA
APWTEETIKQCLYLYLALLPLNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGMGMNSP
ELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLE
KKEVIQALPKLIKLNPIVVKEVFNRLLGTQHSDGSSAVSPLNPGELLIALHNIDSAKCDM
KSIIKATNLCFAERNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQALTMYPRLGGFVMNI
LSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPPQLAAVFDKCPELREPLLAHV
RALTPHQQAHIPLSTMAILEASARHEPEGAPAEEKPPKREEEAKAKAAGVGGPGGAAPPT
RRRRPPPSWGEPSWSPPPIFISIGDDEESSGGRRVPPPTAPPRPPPPPPKVGAAPPL
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttggggggctccgagggccccagcgtcgcctcccagttcttcagcgaggac
gagggcggctgcgacgggggcgccacctccgagagggtggtcgagctcctcaaccaggcg
gctctgatcagcagcgacgccaagatcaacgtcctcaagcaggtgcaggagttgatcatc
aacaaggatcccaccttgctcgacaacttcttggatgagatcatcgccttccaagtggat
aaatccattgaggtccgcaagttcgtggtgggcttcatcgaggaggcctgcaagagggac
atcgagctgctcctcaagctggtcgccaacctcaacatgctcctcaaggatgagaacgtc
aacgtggtgaagaaagccatcctgaccatgacccagctccaccgcgtggccctgcagtgg
atggtgaagtcgaagacgatgagcgagctgcaggaggcctgctgggacatgatgtcggcc
atggccggggacatcatcctcctgctggactcggacaacgacgggatccgcactcacgcc
atcaagttcgtcgagggcctcatcatcaccctgtcccctcgcctccccgactccgacgtc
cccaagcgccacgagaacgacatcagcctcgacaggatcccccgagaccacccctacatc
aaatacggggcgctgtgggcggagtgccggggggcgctggagcagctgctgcggttcatg
gtccatcccgccatctccagcatcaacctgacggtggcgctgggctcgctggccgccatc
gcccgccagcgcccgctcttcatggccgacgtcgtccaggcctacgagaccctgcacgcc
aacctgcctccgacgctggccaagtctcaggtgagcagcgtgcgcaagaacctgaagctg
cacctgctgagcgtgctgcggcacccggcctcggccgacttccagccgcagatcaccacg
ctgctgggcgacctgggcgcccccccggccgacatcgcccgctgcctgcccagcgcccgc
gacgcccgcaagcgcccgcgcgacgaccccgacgccgccgccaagaagatcaagatggag
gcccccctgggcgaggacgacgaggacaaggacctggaggcggtggcggcggcggccgtg
gccaaaccgggcggcgccacctccggcccctccgacatcgacatcacggccgagttcctg
cagccgctcctcacgccggacaacgtcgccaacctggtgctgatcagcatggtgtacctg
cccgaggccatgcccgcgtccttccaggccacctacacgccggtggagtcggcgggcacc
gaggcgcagatcaagcacttggcgcgcctcatggccacccagatgacggccgccgggctg
ggacccggggtggagcagacgcggcacctcaaggaggaacccaaggaggagaaggcggcc
aaacccgagagcgtggtcatcaagcggcgcctctcggcgctggcgcagggccaggccatc
tcggtgctgggggcgccgggagccgcctccaacctgctggaggaggagacgccgcaggcc
aaacggcgcccggagcccatcatcccggccacccaaccccgcctggccggagcgggtggc
cggaagaaggttttccgcctcagcgacgtcctcaagccgctgtcggaggtgcaggtggag
aagctgaagctcagcgccgtcacccgcatcctgcgagccgagcgcgccgtggcctgcagc
ggcgccgcccaggctcgcgtgaagatcctggcggcgctggtgacgcagctggaggtgccg
ctcaagagtgaggtcctggccttcatcctggaggacgtgaggtcgcgcttggacctggcc
ttcgcgtggctcttccaggagtacaacgtctacctgagccacctgcccgggggcagcctg
gagcgctacgacgagtgtctcatcgggctcctcgccggcctccaggagaaacccgaccag
aaggacgggatcttcaccaagctggtcctggaggcccctctgatcaccgagagcgccctg
gaggttctccgcaaatactgcgaggacgagagccggacctacctgggcatgtccaccctg
cgggacctcatcttcaagaggccctcgcgacagttccagtatctccacgtcctcctggac
ctcagctcccacgagaaggacaaggtccgccagcaggccctgctcttcatcaagaggatg
tacgagaaggaccagctgagggactacgtggagaagttcgccctcaactacctgcagctc
ctggtccacccgaacccgccctccgtgctcttcggagccgacaaggacaccgaggtggct
gctccgtggaccgaggagaccatcaagcagtgtctctacctctacctggctctcctgccc
ctcaaccacaagctcatccacgagttggcgtccgtctacaccgaggccatcgccgacatc
aaacgcaccgtcctgcgcgtcatcgagcagccgatccgagggatggggatgaactcgccg
gagctgctcctgctggtggagaattgtcccaagggagccgagaccctggtgacccggtgc
ctgcacagcctgacggacaaagttccaccttctcctgagctggtcaagagggttcgcgac
ctctaccacaagcggctcccggacgtccggttcctcatcccggtcctcaacgggctggag
aagaaagaggtgatccaggccctgcccaagctcatcaagctcaaccccatcgtggtcaag
gaggtcttcaaccgcctgctggggacgcagcacagtgacggttcctcagccgtgtccccc
ctgaacccgggcgagctcctcatcgccctccacaacatcgactcggccaagtgcgacatg
aagtccatcatcaaggccaccaacctttgcttcgccgagcgcaacgtctacacgtcggag
gtcctggccgtggtgatgcagcagctgatggagcagaacccgctgcccatgctgctcatg
agaaccgtcatccaggccctcaccatgtacccgcgcctcggcggcttcgtcatgaacatc
ctctcccgcctcatcatgaagcaggtgtggaagtacccgaaggtgtgggaaggcttcatc
aagtgctgccagcgcaccaagccccagtccttccaggtgatcctgcagctgcctccgccc
cagctcgccgccgtcttcgacaagtgccccgagctccgcgagccccttctcgcccacgtc
cgcgccctcaccccccaccagcaagctcacatcccgctctccaccatggccatcctggag
gcctcggcgcgccacgagcccgagggggcccccgcagaggagaagcccccgaagcgcgag
gaggaggcgaaggcgaaggccgcgggggtcgggggtcccgggggggcggcccccccaacc
cggcgccgccgcccccccccgagctggggggagccgagctggagcccccccccgatcttc
atcagcatcggggacgacgaggagagctcgggggggcgccgcgtcccccccccgacggca
cctcccaggcccccgccgcccccccccaaggttggtgcggccccccccctctaa
DBGET
integrated database retrieval system
