Pectobacterium odoriferum: BCS7_00645
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Entry
BCS7_00645 CDS
T03424
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv00541
Biosynthesis of various nucleotide sugars
pcv01100
Metabolic pathways
pcv01250
Biosynthesis of nucleotide sugars
Module
pcv_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BCS7_00645 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcv01005
]
BCS7_00645 (rfaD)
Enzymes [BR:
pcv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BCS7_00645 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pcv01005
]
Core region
BCS7_00645 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AIU86867
UniProt:
A0ABD6VMA1
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All DBs
Position
complement(145295..146227)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKSLNDIGYRDILVVDNLKDGTKFANLVDLDIADYVDKEDFIASI
VAGDDLGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRNIPFLYASSAATY
GGRNDNFIEARQYEQPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGENPKLFSGSENFQRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADATLAFHQKGSVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggtgccggttttatcggcagcaatatcgtaaaatctctgaat
gacatcggctatcgggacattctggttgtcgataacctgaaagacggcaccaagttcgcc
aatctggtcgatctggacatcgcagattacgtggataaagaagatttcatcgccagcatc
gttgcaggcgacgatctgggcgatatcgaagccgtattccatgaaggcgcttgctcttcc
accaccgagtgggatggcaaatacatgatggataacaactatcagtattctaaagacgtg
ctgcactattgcctcgatcgcaacattccgttcctgtatgcctcgtctgccgcgacctac
ggcggtcgtaacgataactttatcgaagcgcgccaatacgagcagccgctgaacgtctat
ggctactccaagttcctgttcgatcagtacgtgcgtgaaattctcccagaagctgaatcg
cagatctgcggcttccgctatttcaacgtctacggaccacgcgaaggccacaaaggcagc
atggcgagtgtcgcgttccatctgaacaaccagattaaccagggtgaaaatccgaagctg
ttctccggtagcgagaacttccaacgtgactttatctacgtcggtgatgtcgccgccgtc
aacctgtggttctggcaaaacggtgtttccggcatcttcaactgcggtaccggtcgcgcc
gaatccttccaggctgttgccgatgccaccctcgccttccatcagaaaggcagcgtggaa
tacatcgaatttcctgagaaactgaaaggccgctatcaggcttatacacaagccgacctc
accaatttgcgtgccgcaggctatgacaagccgttcaaaaccgtcgccgaaggcgtggcg
gaatatatggcctggctgaaccgtaccgtttaa
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