Pectobacterium odoriferum: BCS7_02000
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Entry
BCS7_02000 CDS
T03424
Name
(GenBank) valyl-tRNA synthase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BCS7_02000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcv01007
]
BCS7_02000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcv03016
]
BCS7_02000
Enzymes [BR:
pcv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
BCS7_02000
Amino acid related enzymes [BR:
pcv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
BCS7_02000
Transfer RNA biogenesis [BR:
pcv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BCS7_02000
Prokaryotic type
BCS7_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
AIU87096
UniProt:
A0ABD6VUF4
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All DBs
Position
complement(440502..443357)
Genome browser
AA seq
951 aa
AA seq
DB search
METKYNPQDIEQPLYEHWEKQGYFKPHGDTSKESFSIMIPPPNVTGSLHMGHAFQQTIMD
TLIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWQWKGE
SGGNITNQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR
TAISDLEVENREVKGSMWHLRYPLADGVKTADGKDYLVVATTRPETVLGDTGVAVNPEDP
RYKDLIGKEVILPLIGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMVNI
LTFDGDIRQSAEIFDTNGEASTACSSDIPEAFQGLERFAARKALVAAFDELGLLEEIKAH
DLTVPYGDRGGVVIEPMLTDQWYVRAAVLAKPAVEAVEDGRIQFVPKQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDANGNVYVGRTEAEVRSENNLADDVVLNQDEDVLDTWFSSG
LWTFSTLGWPEQTPDLKAFHPSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKSQVPFHT
VYMTGLIRDEEGQKMSKSKGNVIDPLDMVDGISLDALLEKRTGNMMQPQLAEKIRKRTEK
QFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQD
CGFGAGEKVLSLADRWILAEFNRTVKAYREALDGYRFDIAANILYEFTWNQFCDWYLELT
KPVMNGGSEAELRGTRHTLVTVLEALLRLAHPIIPFITETIWLRVKALKGISADTIMLQP
FPEFDVAQEDTLALNDLEWIKQAIIAVRNIRAEMNIAPGKPLEVLLRDVTAEAQRRVEEN
RSFIQTLARLESITLLPAGDKGPVSVTKLIEGAELLIPMAGLIDKAAELDRLAKEVAKIE
AEIERIESKLSNEGFVARAPEAVVAKEREKLDGYAVAKAKLLEQHAVIAAL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaatataacccgcaagatatcgagcagccgctctacgaacactgggaaaag
caaggctacttcaagccgcacggcgacacgagtaaagaaagcttcagcatcatgatcccg
ccgcccaacgtcaccggcagcttgcatatgggtcatgctttccagcaaaccattatggat
acgttgatccgctatcagcgcatgcagggcaagaatactctgtggcaggcgggtactgac
cacgctggtatcgccacgcaaatggtcgttgagcgcaagatcgccgcagaagaaggcaaa
actcgccacgattatggccgcgaagcgttcatcgacaaaatctggcagtggaaaggcgaa
tctggtggcaacattaccaatcagatgcgccgtctgggtaactccgttgactgggagcgc
gagcgtttcaccatggatgaaggcctgtccaatgcggtgaaagaagtgttcgtccgtctg
tataaagaagacctgatttaccgtggcaagcgtctggtgaactgggatccgaaactgcgc
accgcgatttccgatctggaagtagagaaccgcgaagtgaaagggtcaatgtggcacctg
cgttatccgctggctgatggcgtgaaaaccgccgacgggaaagactatctggtcgtcgcg
accacccgcccagaaaccgtgctgggtgatactggtgtcgccgttaacccggaagatccg
cgttataaagatctgattggcaaagaggtgatcctgccgctgattggtcgtcgaattccg
atcgttggcgacgaacacgccgatatggaaaaaggcaccggctgcgtgaagatcacgcca
gcgcacgacttcaacgactacgaagttggtaaacgccaccaattgccgatggtcaatatc
ctgacattcgacggtgatatccgccagagcgctgaaatttttgataccaatggcgaagcc
agcaccgcttgcagcagcgacattccagaagccttccagggtctggagcgttttgccgca
cgtaaagcgctggtcgccgcatttgatgaactcggccttctggaagagatcaaagcgcac
gatctgaccgtgccttacggcgaccgtggcggcgttgtcattgagccgatgctgaccgac
cagtggtacgtgcgtgctgccgtactggctaaaccggcagtggaagcggtggaagatggc
cgcattcagttcgtaccaaaacagtacgaaaacatgtacttcagctggatgcgcgacatt
caggactggtgtatatcccgtcaactgtggtggggtcaccgcattccagcctggtacgat
gccaacggcaacgtctatgtgggtcgtaccgaagcggaagtacgcagcgaaaacaacctc
gctgacgatgtcgtcctgaatcaggatgaagacgtactggatacctggttctcatccggg
ctgtggacgttctctacgctgggttggccagagcaaacgccagatctgaaagccttccac
ccaagcagcgtgatggtcagcggcttcgacatcatcttcttctggattgcccgcatgatc
atgctgaccatgcatttcatcaaagatgaagacggaaaatcgcaggtaccattccacacc
gtttacatgaccggcctgatccgtgatgaggaaggccagaagatgtctaaatccaaaggg
aacgtcatcgacccgctggatatggtggacggtatttcgctggacgccctgctggaaaaa
cgtaccggcaacatgatgcagccgcagctggcggaaaaaatccgcaagcgcaccgagaaa
cagttcccgaacggcatcgagcctcacggtacagatgccctgcgcttcacgctggcggca
ctggcctctaccggtcgcgacatcaactgggacatgaagcgtctggaaggttaccgcaac
ttctgtaacaagctgtggaacgccagccgttttgtgctgatgaacaccgaagatcaggat
tgcggctttggcgcaggcgagaaagtgctgtcgctggctgaccgctggattctggcggaa
ttcaaccgcacggtgaaagcctaccgcgaggcgctggacggctatcgctttgatattgca
gccaacattctgtacgagttcacctggaaccagttctgcgattggtatctggaactgacg
aagccagtgatgaatggcggttcagaagcggaactgcgcggtacgcgtcacacgctggtt
actgtactggaagcgttgctgcgtctggcacacccgattattccgttcattaccgaaacc
atctggctacgcgttaaagcgctgaaaggcattagcgctgacacgatcatgctgcaaccc
ttccctgagttcgatgtcgcgcaggaagatacgctggcgctgaacgatctggaatggatc
aagcaggcgattatcgcggtgcgtaacattcgcgcagaaatgaacatcgcgccgggcaaa
ccgctggaagtcttactgcgtgatgtcactgctgaagcacagcgtcgcgtggaagagaac
cgcagcttcatccaaacgctggcgcgtctggaaagcattacgctgctgcctgcgggcgac
aaaggtccggtttccgtcactaaactcatcgagggtgccgagctgttaattccgatggca
ggcctgatcgacaaagcggcagaactggatcgtctggcgaaagaagtggcgaaaatcgaa
gccgagattgagcgtatcgaaagtaagctgtccaatgaaggctttgtggctcgtgcaccg
gaagcggtcgtagccaaagagcgcgagaagctggacggttacgccgtagcgaaagccaaa
ctgctggagcagcacgcggtcatcgctgcgctgtaa
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