Pectobacterium odoriferum: BCS7_02600
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Entry
BCS7_02600 CDS
T03424
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCS7_02600 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcv03019
]
BCS7_02600 (groEL)
03110 Chaperones and folding catalysts [BR:
pcv03110
]
BCS7_02600 (groEL)
03029 Mitochondrial biogenesis [BR:
pcv03029
]
BCS7_02600 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcv04147
]
BCS7_02600 (groEL)
Enzymes [BR:
pcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BCS7_02600 (groEL)
Messenger RNA biogenesis [BR:
pcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BCS7_02600 (groEL)
Chaperones and folding catalysts [BR:
pcv03110
]
Heat shock proteins
HSP60 / Chaperonin
BCS7_02600 (groEL)
Mitochondrial biogenesis [BR:
pcv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BCS7_02600 (groEL)
Exosome [BR:
pcv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BCS7_02600 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
BCS7_02600 (groEL)
Exosomal proteins of breast cancer cells
BCS7_02600 (groEL)
Exosomal proteins of colorectal cancer cells
BCS7_02600 (groEL)
Exosomal proteins of bladder cancer cells
BCS7_02600 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AIU87202
UniProt:
A0ABD6VW57
LinkDB
All DBs
Position
588084..589730
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKMIAEAMDKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGTGEEAAIQGRVAQIRQQVEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALAATRAAVEEGVVAGGGVALV
RVAAKLSSLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANSVKAGEGNYGYNA
ATEEYGNMIDFGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKSDAPDLGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgctcgcgtaaaaatgctgcgcggcgta
aatgtactggctgatgcagtgaaggttaccctgggcccgaaaggccgtaatgtcgtgttg
gataaatccttcggtgcaccgactattactaaagacggcgtatctgttgcacgtgaaatc
gagctggaagacaagtttgagaacatgggcgcacagatggtgaaagaagttgcctctaaa
gcgaatgacgcagcaggcgacggcaccacgaccgcaaccgtattggcgcaggctatcatc
actgaaggcctgaaagctgttgctgcgggcatgaacccgatggatctgaagcgcggtatc
gataaagccgttatcgccgctgttgaagagctgaaagcactgtctgtaccgtgctctgac
tctaaagctatcgctcaggttggtaccatctctgctaactccgacgaaaccgtaggcaaa
atgattgccgaagcaatggacaaagtcggcaaagaaggtgttatcaccgttgaagaaggt
accggtctgcaagatgagctggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccgtacttcatcaacaagccggaaactggtgctgtagaactggaaagcccgttcatc
ctgctggctgacaaaaaaatctccaacatccgcgaaatgctgccagtactggaagccgta
gcgaaagcgggcaaaccgctggttatcgttgctgaagatgttgaaggcgaagcactggca
acgctggtggttaacaccatgcgtggcattgtgaaagttgctgcggtgaaagcaccgggc
ttcggcgaccgtcgtaaagctatgctgcaagacatcgcgacgctgactggcggtaccgtt
atctctgaagagatcggtctggagctggaaaaagcgacgctggaagatctgggtcaggca
aaacgcgttgtgatcaacaaagacaccaccaccatcatcgatggtacgggtgaagaagct
gcgatccagggccgtgttgctcagatccgtcagcaggttgaagaagcaacgtctgattac
gatcgcgaaaaactgcaagagcgtgtcgctaaactggctggcggcgtagccgttatcaaa
gttggcgcagcaactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgccttg
gctgcgactcgcgcggcggtagaagaaggcgtggttgctggtggtggtgtggcgctggtt
cgcgttgcggctaaactgtcttctctgactgctcaaaatgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcgatggaagctccactgcgtcagatcgtttccaacgctggcgaa
gagccatctgtggttgcgaacagcgttaaagcaggcgaaggtaactacggttacaacgca
gcaactgaagaatacggcaacatgatcgatttcggtatcctggacccaaccaaagtcacc
cgttctgctctgcagttcgcggcttctgttgctggtctgatgatcactaccgaatgtatg
gtaaccgacctgccgaaaagcgatgcacctgacttaggtggcgctggtggtatgggcggc
atgggtggtatgggcggcatgatgtaa
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