Pectobacterium odoriferum: BCS7_02800
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Entry
BCS7_02800 CDS
T03424
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCS7_02800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcv03400
]
BCS7_02800
Enzymes [BR:
pcv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BCS7_02800
DNA repair and recombination proteins [BR:
pcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCS7_02800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIU87238
LinkDB
All DBs
Position
629373..629876
Genome browser
AA seq
167 aa
AA seq
DB search
MITDILAMNLQVVFCGINPGLSTAHHGYHFANPSNRFWKVIHQAGFTERLLTPAEEQHLL
DTGCGITMLVERPTVEATELGRDELLQGGNTIVEKMTHYQPRALAVLGKQAFSQAFGIKK
VSWGRQELRIGEAQVWVLPNPSGLNRATLESLVASYQELHRALQDDL
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgatattctggccatgaatcttcaggttgttttctgcggcattaaccctggg
ctgtcgacggctcatcacggttaccacttcgcgaatcccagtaatcgcttctggaaagtg
attcatcaggcaggctttactgaacgtttgctgacacctgcggaagaacagcatctgttg
gacactggatgcggcatcaccatgttggtggagcgcccaacggttgaagccaccgagctg
gggcgagatgagctgctgcaaggtgggaatacgatagtggagaagatgacgcactatcag
ccgcgtgcgctggcggtgttagggaagcaggcgttcagtcaggcatttggcattaagaag
gtttcgtgggggcgccaggagctgcgtattggcgaggcgcaggtttgggtgctgccgaac
cctagtgggctgaatcgtgcgacgctggagtcgctggtggcgtcgtatcaggaactgcat
cgggcgttgcaggatgacctgtaa
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