Pectobacterium odoriferum: BCS7_03015
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Entry
BCS7_03015 CDS
T03424
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcv03016
]
BCS7_03015 (truB)
Enzymes [BR:
pcv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BCS7_03015 (truB)
Transfer RNA biogenesis [BR:
pcv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BCS7_03015 (truB)
Prokaryotic type
BCS7_03015 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIU87277
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All DBs
Position
678350..679294
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AA seq
314 aa
AA seq
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MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATDLEQALEGFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPTERMVTLEQLAALAEQAQTQEQPLSQSLDPL
LMPMESPVIDFPEVNLTPVVAGYLKLGQAVQAANVPLNGMVRITEGDEHKFIGMGEIDSD
GRVAPRRLVVEFPE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtccccgtcgccgtggccgtgatgtacacggcgtattgttattagataagccg
cagggcgtgtcgtctaatgatgttttgcagaaggtaaaacggatttttaacgctaacaga
gcgggccatacgggggcgttagatccattagccactggtatgctgccgatttgccttggg
gaagcgacgaaattttcccagtatctgctggattctgataaacgctaccgtgttattgct
cgccttgggcaacggaccgacacttctgatgccgacggcaacgtgattgaagagcgtgcg
attggcttttctgctaccgatctagagcaggcgctggagggctttcgcgggaccacgcag
caagtgccgtccatgtactcggcgctgaagtatcaggggcgtaagctatacgagtatgcg
cgtcaggggctgacggttccgcgtgaagcacgtgaaatcaccgtgtacgaactgcagttc
attcgctgggaaggggatgagctagagctggagattcactgctcgaaaggcacgtacatc
cgtaccattattgacgatctgggcgaaaagctgggctgtggcgcgcatgtgatttacctg
cgtcgtttacaggttgctacgtatcctaccgaaagaatggtgacgctggagcagctagca
gctttggccgagcaggctcaaacacaagagcaaccactttctcagagtctcgatccgctg
ctcatgccgatggaaagcccagtcattgattttcctgaggtgaacttgacgccggttgtt
gctggctatttgaagctggggcaagcggttcaggcagcgaatgtgcccttgaacggcatg
gtgagaatcaccgaaggtgacgaacacaaatttatcggaatgggcgaaatcgacagcgat
ggccgcgttgcgccacgtcgcttggttgttgagtttccggagtaa
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